Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014216.1 Kokia drynarioides strain JFW-HI SEQ_129249, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35895

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1404--1486
28
3.0
27
85
7
112
25
26
16
31
1.97
5902--6586
49
14.0
49
76
2
318
20
22
17
40
1.91
5928--6586
147
4.5
147
78
2
604
20
22
16
40
1.91
5986--6504
98
5.3
98
73
4
382
20
21
16
40
1.91
14205--14229
13
1.9
13
100
0
50
16
8
8
68
1.38
19238--19298
28
2.1
28
85
8
79
26
8
29
36
1.85
19252--19312
28
2.1
28
87
6
86
27
4
34
32
1.78
19352--19473
58
2.1
57
79
7
129
36
5
23
34
1.79
19373--19747
59
6.4
58
81
7
386
34
4
24
36
1.75
19402--19748
29
11.8
29
74
10
233
34
3
24
36
1.74
19285--19698
117
3.5
118
78
10
370
36
4
24
34
1.77
21537--21632
17
5.6
17
75
7
77
53
6
5
35
1.49
23060--23453
62
6.4
62
91
2
625
32
11
21
34
1.90
25273--25332
5
12.2
5
82
8
70
18
3
0
78
0.89
26479--26730
126
2.0
125
98
0
486
23
19
24
32
1.97
28080--28122
11
4.0
10
82
11
50
81
6
11
0
0.87
28080--28121
10
4.0
10
84
9
57
80
7
11
0
0.88
28080--28123
22
2.0
22
86
8
63
81
6
11
0
0.86
30427--30545
48
2.4
48
80
2
148
66
0
0
31
1.03
30507--30548
9
4.6
9
82
14
50
73
0
0
26
0.83
30456--30542
18
5.3
17
68
21
60
68
1
0
29
0.96
30695--30747
11
4.7
11
83
2
61
50
1
26
20
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31321--31354
18
1.9
17
88
5
50
41
5
0
52
1.25
31395--31434
19
2.1
19
90
0
62
57
7
0
35
1.27
31999--32035
18
2.1
18
100
0
74
21
0
0
78
0.75
32476--32523
13
3.4
13
78
18
51
45
0
0
54
0.99
32476--32520
14
3.1
14
78
12
54
42
0
0
57
0.98
32468--32538
28
2.4
30
83
4
101
50
0
0
49
1.00
32568--32623
18
3.4
18
67
23
59
23
37
0
39
1.55
32845--32891
24
2.0
24
95
0
85
31
14
10
42
1.80
33244--33297
11
5.3
11
74
14
53
48
0
0
51
1.00
33222--33295
31
2.5
29
85
14
107
44
0
0
55
0.99
33248--33304
20
2.8
20
82
7
71
43
0
0
56
0.99
33248--33298
21
2.5
21
84
6
70
47
0
0
52
1.00

Tables:   1

The End!