Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NTFQ01014218.1 Kokia drynarioides strain JFW-HI SEQ_129251, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 48549
ACGTcount: A:0.35, C:0.15, G:0.16, T:0.34
Found at i:29 original size:17 final size:18
Alignment explanation
Indices: 1--83 Score: 111
Period size: 17 Copynumber: 4.8 Consensus size: 18
*
1 TAAAATAAATTTAAATTT
1 TAAAACAAATTTAAATTT
19 T-AAACAAATTT-AATTT
1 TAAAACAAATTTAAATTT
*
35 TAAAATAAATTTAAATTT
1 TAAAACAAATTTAAATTT
53 T-AAACAAATTT-AATTT
1 TAAAACAAATTTAAATTT
*
69 TAAAATAAATTTAAA
1 TAAAACAAATTTAAA
84 GGGAGTATGG
Statistics
Matches: 57, Mismatches: 4, Indels: 8
0.83 0.06 0.12
Matches are distributed among these distances:
16 12 0.21
17 36 0.63
18 9 0.16
ACGTcount: A:0.55, C:0.02, G:0.00, T:0.42
Consensus pattern (18 bp):
TAAAACAAATTTAAATTT
Found at i:44 original size:34 final size:34
Alignment explanation
Indices: 1--83 Score: 166
Period size: 34 Copynumber: 2.4 Consensus size: 34
1 TAAAATAAATTTAAATTTTAAACAAATTTAATTT
1 TAAAATAAATTTAAATTTTAAACAAATTTAATTT
35 TAAAATAAATTTAAATTTTAAACAAATTTAATTT
1 TAAAATAAATTTAAATTTTAAACAAATTTAATTT
69 TAAAATAAATTTAAA
1 TAAAATAAATTTAAA
84 GGGAGTATGG
Statistics
Matches: 49, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
34 49 1.00
ACGTcount: A:0.55, C:0.02, G:0.00, T:0.42
Consensus pattern (34 bp):
TAAAATAAATTTAAATTTTAAACAAATTTAATTT
Found at i:2463 original size:14 final size:14
Alignment explanation
Indices: 2444--2486 Score: 54
Period size: 14 Copynumber: 3.2 Consensus size: 14
2434 TGAAGGAAAA
2444 AAGAAAGAAGGAAG
1 AAGAAAGAAGGAAG
*
2458 AAGAAAAAAGGAAG
1 AAGAAAGAAGGAAG
*
2472 AAG-CAGAA-GAAG
1 AAGAAAGAAGGAAG
2484 AAG
1 AAG
2487 GAGAAGGAGA
Statistics
Matches: 26, Mismatches: 3, Indels: 2
0.84 0.10 0.06
Matches are distributed among these distances:
12 7 0.27
13 3 0.12
14 16 0.62
ACGTcount: A:0.65, C:0.02, G:0.33, T:0.00
Consensus pattern (14 bp):
AAGAAAGAAGGAAG
Found at i:2463 original size:21 final size:22
Alignment explanation
Indices: 2439--2485 Score: 69
Period size: 21 Copynumber: 2.1 Consensus size: 22
2429 TAATTTGAAG
2439 GAAAAAAGAAAGAAG-GAAGAA
1 GAAAAAAGAAAGAAGAGAAGAA
*
2460 GAAAAAAGGAAGAAGCAGAAGAA
1 GAAAAAAGAAAGAAG-AGAAGAA
2483 GAA
1 GAA
2486 GGAGAAGGAG
Statistics
Matches: 23, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
21 14 0.61
23 9 0.39
ACGTcount: A:0.68, C:0.02, G:0.30, T:0.00
Consensus pattern (22 bp):
GAAAAAAGAAAGAAGAGAAGAA
Found at i:2665 original size:18 final size:18
Alignment explanation
Indices: 2642--2676 Score: 61
Period size: 18 Copynumber: 1.9 Consensus size: 18
2632 AAAAAAAAGA
2642 TAAGTTTGATTAATTTTT
1 TAAGTTTGATTAATTTTT
*
2660 TAAGTTTGGTTAATTTT
1 TAAGTTTGATTAATTTT
2677 AAATTTATTT
Statistics
Matches: 16, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
18 16 1.00
ACGTcount: A:0.26, C:0.00, G:0.14, T:0.60
Consensus pattern (18 bp):
TAAGTTTGATTAATTTTT
Found at i:3629 original size:16 final size:16
Alignment explanation
Indices: 3583--3631 Score: 61
Period size: 16 Copynumber: 3.2 Consensus size: 16
3573 TAAACCTAGC
3583 TAATTAATTACCAAAA
1 TAATTAATTACCAAAA
3599 T-A-TAATATA--AAAA
1 TAATTAAT-TACCAAAA
3612 TAATTAATTACCAAAA
1 TAATTAATTACCAAAA
3628 TAAT
1 TAAT
3632 AACACCATCA
Statistics
Matches: 28, Mismatches: 0, Indels: 10
0.74 0.00 0.26
Matches are distributed among these distances:
13 5 0.18
14 7 0.25
15 7 0.25
16 9 0.32
ACGTcount: A:0.59, C:0.08, G:0.00, T:0.33
Consensus pattern (16 bp):
TAATTAATTACCAAAA
Found at i:5004 original size:43 final size:43
Alignment explanation
Indices: 4922--5006 Score: 109
Period size: 43 Copynumber: 2.0 Consensus size: 43
4912 ATTAACATGT
* * *
4922 TAAATTATATTACTTAACTCGTGTTAATATGGTTTCATGTTAC
1 TAAATTATATTACTTAACTCGTATTAATATGCTTACATGTTAC
* *
4965 TAAATTATATTACTTTACTCTTATTAATAT-CTTGACATGTTA
1 TAAATTATATTACTTAACTCGTATTAATATGCTT-ACATGTTA
5007 TTAATTGTGC
Statistics
Matches: 36, Mismatches: 5, Indels: 2
0.84 0.12 0.05
Matches are distributed among these distances:
42 2 0.06
43 34 0.94
ACGTcount: A:0.32, C:0.12, G:0.08, T:0.48
Consensus pattern (43 bp):
TAAATTATATTACTTAACTCGTATTAATATGCTTACATGTTAC
Found at i:5638 original size:45 final size:45
Alignment explanation
Indices: 5574--5710 Score: 184
Period size: 45 Copynumber: 3.0 Consensus size: 45
5564 CCCTAGCTCA
* *
5574 TCAAGCCAAGGATATCAGCCTTAGTTTGACGAGCCACCACAATAC
1 TCAAGCCAAGGATATCAGCCTCAGTTTGACGAGCCACCGCAATAC
* *
5619 TCAAGCTAAGGATATCAGCCTCAGTTTGACAAGCCACCGCAATAC
1 TCAAGCCAAGGATATCAGCCTCAGTTTGACGAGCCACCGCAATAC
** * * * *
5664 TCAAGGGAAGGATATCAGGCTGAGTTTGATGAGTCACCGCAATAC
1 TCAAGCCAAGGATATCAGCCTCAGTTTGACGAGCCACCGCAATAC
5709 TC
1 TC
5711 TACTCCTCCT
Statistics
Matches: 81, Mismatches: 11, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
45 81 1.00
ACGTcount: A:0.32, C:0.26, G:0.21, T:0.21
Consensus pattern (45 bp):
TCAAGCCAAGGATATCAGCCTCAGTTTGACGAGCCACCGCAATAC
Found at i:5747 original size:21 final size:21
Alignment explanation
Indices: 5702--5744 Score: 59
Period size: 21 Copynumber: 2.0 Consensus size: 21
5692 ATGAGTCACC
*
5702 GCAATACTCTACTCCTCCTGG
1 GCAATACTCTACTCCTCATGG
*
5723 GCAATACTTTACTCCTTCATGG
1 GCAATACTCTACTCC-TCATGG
5745 CAAATGAACC
Statistics
Matches: 19, Mismatches: 2, Indels: 1
0.86 0.09 0.05
Matches are distributed among these distances:
21 14 0.74
22 5 0.26
ACGTcount: A:0.21, C:0.33, G:0.14, T:0.33
Consensus pattern (21 bp):
GCAATACTCTACTCCTCATGG
Found at i:5994 original size:21 final size:21
Alignment explanation
Indices: 5970--6028 Score: 66
Period size: 21 Copynumber: 2.8 Consensus size: 21
5960 CCTAACATTA
*
5970 AACCCTAAACCTTAAACTTAG
1 AACCATAAACCTTAAACTTAG
*
5991 AACCATAAACCTTGAATCTTAG
1 AACCATAAACCTT-AAACTTAG
**
6013 -ACTTTAAACCTTAAAC
1 AACCATAAACCTTAAAC
6029 ACTAAATCCT
Statistics
Matches: 32, Mismatches: 5, Indels: 3
0.80 0.12 0.08
Matches are distributed among these distances:
20 3 0.09
21 22 0.69
22 7 0.22
ACGTcount: A:0.42, C:0.25, G:0.05, T:0.27
Consensus pattern (21 bp):
AACCATAAACCTTAAACTTAG
Found at i:6001 original size:7 final size:7
Alignment explanation
Indices: 5967--6028 Score: 54
Period size: 7 Copynumber: 8.9 Consensus size: 7
5957 TTTCCTAACA
5967 TTAAACC
1 TTAAACC
*
5974 CTAAACC
1 TTAAACC
5981 TTAAA-C
1 TTAAACC
5987 TTAGAACC
1 TTA-AACC
*
5995 ATAAACC
1 TTAAACC
* *
6002 TTGAATC
1 TTAAACC
* *
6009 TTAGACT
1 TTAAACC
6016 TTAAACC
1 TTAAACC
6023 TTAAAC
1 TTAAAC
6029 ACTAAATCCT
Statistics
Matches: 41, Mismatches: 12, Indels: 4
0.72 0.21 0.07
Matches are distributed among these distances:
6 4 0.10
7 34 0.83
8 3 0.07
ACGTcount: A:0.42, C:0.24, G:0.05, T:0.29
Consensus pattern (7 bp):
TTAAACC
Found at i:8706 original size:4 final size:4
Alignment explanation
Indices: 8699--8750 Score: 52
Period size: 4 Copynumber: 13.0 Consensus size: 4
8689 ATGCATTACA
* * * *
8699 TTTC TTTC TTTC -TTC TTTC TTTCC TCTC ATTC ATTC ATTC TTTC TTTC
1 TTTC TTTC TTTC TTTC TTTC TTT-C TTTC TTTC TTTC TTTC TTTC TTTC
8747 TTTC
1 TTTC
8751 CCGTTTATTT
Statistics
Matches: 42, Mismatches: 4, Indels: 4
0.84 0.08 0.08
Matches are distributed among these distances:
3 3 0.07
4 36 0.86
5 3 0.07
ACGTcount: A:0.06, C:0.29, G:0.00, T:0.65
Consensus pattern (4 bp):
TTTC
Found at i:8917 original size:26 final size:27
Alignment explanation
Indices: 8888--8939 Score: 63
Period size: 27 Copynumber: 2.0 Consensus size: 27
8878 GTCAAGTGGC
*
8888 AAAACACCT-CTT-AGTGCCGTCACTTG
1 AAAA-ACCTCCTTCAGTGCCGCCACTTG
*
8914 AAAATCCTCCTTCAGTGCCGCCACTT
1 AAAAACCTCCTTCAGTGCCGCCACTT
8940 TGTGTCCTTC
Statistics
Matches: 22, Mismatches: 2, Indels: 3
0.81 0.07 0.11
Matches are distributed among these distances:
25 3 0.14
26 7 0.32
27 12 0.55
ACGTcount: A:0.25, C:0.35, G:0.13, T:0.27
Consensus pattern (27 bp):
AAAAACCTCCTTCAGTGCCGCCACTTG
Found at i:10506 original size:17 final size:18
Alignment explanation
Indices: 10484--10520 Score: 58
Period size: 18 Copynumber: 2.1 Consensus size: 18
10474 TAATAAAAAT
10484 ATAATTTA-ATTATTATA
1 ATAATTTATATTATTATA
*
10501 ATAATTTATATTTTTATA
1 ATAATTTATATTATTATA
10519 AT
1 AT
10521 TTTTAAAAAA
Statistics
Matches: 18, Mismatches: 1, Indels: 1
0.90 0.05 0.05
Matches are distributed among these distances:
17 8 0.44
18 10 0.56
ACGTcount: A:0.43, C:0.00, G:0.00, T:0.57
Consensus pattern (18 bp):
ATAATTTATATTATTATA
Found at i:11435 original size:27 final size:29
Alignment explanation
Indices: 11377--11457 Score: 85
Period size: 27 Copynumber: 2.7 Consensus size: 29
11367 TTAGTAAAAA
**
11377 AGTTTAGTTTTAATATTTAATTTAATTTTTG
1 AGTTTA-TTTTAATA-TTAATTTAATACTTG
*
11408 A-TTT-TTTTAATATTAATTTGATACTTG
1 AGTTTATTTTAATATTAATTTAATACTTG
11435 AGTTTAATTTTAATATTCAATTT
1 AGTTT-ATTTTAATATT-AATTT
11458 TATATTCAAA
Statistics
Matches: 43, Mismatches: 3, Indels: 8
0.80 0.06 0.15
Matches are distributed among these distances:
27 13 0.30
28 11 0.26
30 13 0.30
31 6 0.14
ACGTcount: A:0.31, C:0.02, G:0.07, T:0.59
Consensus pattern (29 bp):
AGTTTATTTTAATATTAATTTAATACTTG
Found at i:17517 original size:30 final size:30
Alignment explanation
Indices: 17481--17543 Score: 99
Period size: 30 Copynumber: 2.1 Consensus size: 30
17471 TGGTGGGTTT
* *
17481 GATTTTAAAATAAATAAGTTATTGTGGATC
1 GATTTTAAAATAAATAAATTATCGTGGATC
*
17511 GATTTTAAAATAAATAAATTATCGTGGCTC
1 GATTTTAAAATAAATAAATTATCGTGGATC
17541 GAT
1 GAT
17544 AATAAAAGAT
Statistics
Matches: 30, Mismatches: 3, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
30 30 1.00
ACGTcount: A:0.40, C:0.06, G:0.16, T:0.38
Consensus pattern (30 bp):
GATTTTAAAATAAATAAATTATCGTGGATC
Found at i:17550 original size:30 final size:30
Alignment explanation
Indices: 17486--17550 Score: 85
Period size: 30 Copynumber: 2.2 Consensus size: 30
17476 GGTTTGATTT
* * **
17486 TAAAATAAATAAGTTATTGTGGATCGATTT
1 TAAAATAAATAAATTATCGTGGATCGATAA
*
17516 TAAAATAAATAAATTATCGTGGCTCGATAA
1 TAAAATAAATAAATTATCGTGGATCGATAA
17546 TAAAA
1 TAAAA
17551 GATGTTTTGG
Statistics
Matches: 30, Mismatches: 5, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
30 30 1.00
ACGTcount: A:0.46, C:0.06, G:0.14, T:0.34
Consensus pattern (30 bp):
TAAAATAAATAAATTATCGTGGATCGATAA
Found at i:24803 original size:29 final size:30
Alignment explanation
Indices: 24751--24807 Score: 80
Period size: 29 Copynumber: 1.9 Consensus size: 30
24741 ATCTTTTTAG
* *
24751 TTGATTCATTTTAATAGTACAGGGACTAAA
1 TTGATCCATTTTAATAATACAGGGACTAAA
*
24781 TTGATCCA-TTTAATAATAGAGGGACTA
1 TTGATCCATTTTAATAATACAGGGACTA
24808 CTATGACCCG
Statistics
Matches: 24, Mismatches: 3, Indels: 1
0.86 0.11 0.04
Matches are distributed among these distances:
29 17 0.71
30 7 0.29
ACGTcount: A:0.37, C:0.11, G:0.18, T:0.35
Consensus pattern (30 bp):
TTGATCCATTTTAATAATACAGGGACTAAA
Found at i:32741 original size:10 final size:10
Alignment explanation
Indices: 32726--32778 Score: 51
Period size: 10 Copynumber: 5.6 Consensus size: 10
32716 TAAAAATTTG
32726 TTAAATATAT
1 TTAAATATAT
32736 TTAAATATAT
1 TTAAATATAT
*
32746 AT-AAT-TAT
1 TTAAATATAT
*
32754 TCAAAT-T-T
1 TTAAATATAT
32762 TATAAATATAT
1 T-TAAATATAT
32773 TTAAAT
1 TTAAAT
32779 CACAATAAAA
Statistics
Matches: 35, Mismatches: 4, Indels: 8
0.74 0.09 0.17
Matches are distributed among these distances:
8 5 0.14
9 11 0.31
10 17 0.49
11 2 0.06
ACGTcount: A:0.49, C:0.02, G:0.00, T:0.49
Consensus pattern (10 bp):
TTAAATATAT
Found at i:32741 original size:19 final size:18
Alignment explanation
Indices: 32719--32778 Score: 59
Period size: 19 Copynumber: 3.2 Consensus size: 18
32709 TTTTATATAA
32719 AAATTTGTTAAATATATTT
1 AAATTT-TTAAATATATTT
* * *
32738 AAATATATATAAT-TATTC
1 AAATTTTTA-AATATATTT
32756 AAATTTTATAAATATATTT
1 AAATTTT-TAAATATATTT
32775 AAAT
1 AAAT
32779 CACAATAAAA
Statistics
Matches: 32, Mismatches: 6, Indels: 6
0.73 0.14 0.14
Matches are distributed among these distances:
18 14 0.44
19 18 0.56
ACGTcount: A:0.48, C:0.02, G:0.02, T:0.48
Consensus pattern (18 bp):
AAATTTTTAAATATATTT
Found at i:33086 original size:19 final size:20
Alignment explanation
Indices: 33059--33096 Score: 51
Period size: 19 Copynumber: 1.9 Consensus size: 20
33049 TTTTGTTATT
*
33059 GTTTTGGCC-ATTTCAATCC
1 GTTTCGGCCTATTTCAATCC
*
33078 GTTTCGGCCTGTTTCAATC
1 GTTTCGGCCTATTTCAATC
33097 AATTTCAATT
Statistics
Matches: 16, Mismatches: 2, Indels: 1
0.84 0.11 0.05
Matches are distributed among these distances:
19 8 0.50
20 8 0.50
ACGTcount: A:0.13, C:0.26, G:0.18, T:0.42
Consensus pattern (20 bp):
GTTTCGGCCTATTTCAATCC
Found at i:33539 original size:9 final size:9
Alignment explanation
Indices: 33525--33558 Score: 50
Period size: 9 Copynumber: 3.8 Consensus size: 9
33515 AATATTATGA
33525 ATTTTTTAT
1 ATTTTTTAT
33534 ATTTTTTAT
1 ATTTTTTAT
* *
33543 TTTTTTTTT
1 ATTTTTTAT
33552 ATTTTTT
1 ATTTTTT
33559 TTAGAAAGGC
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
9 22 1.00
ACGTcount: A:0.15, C:0.00, G:0.00, T:0.85
Consensus pattern (9 bp):
ATTTTTTAT
Found at i:33542 original size:20 final size:20
Alignment explanation
Indices: 33519--33561 Score: 50
Period size: 20 Copynumber: 2.1 Consensus size: 20
33509 TTTACAAATA
33519 TTATGAATTTTTTATATTTT
1 TTATGAATTTTTTATATTTT
*** *
33539 TTATTTTTTTTTTATTTTTT
1 TTATGAATTTTTTATATTTT
33559 TTA
1 TTA
33562 GAAAGGCCAA
Statistics
Matches: 19, Mismatches: 4, Indels: 0
0.83 0.17 0.00
Matches are distributed among these distances:
20 19 1.00
ACGTcount: A:0.19, C:0.00, G:0.02, T:0.79
Consensus pattern (20 bp):
TTATGAATTTTTTATATTTT
Found at i:34424 original size:7 final size:7
Alignment explanation
Indices: 34412--34445 Score: 50
Period size: 7 Copynumber: 4.7 Consensus size: 7
34402 CAATCCATTC
34412 ATAAATA
1 ATAAATA
*
34419 ATAAATT
1 ATAAATA
34426 ATAAATTA
1 ATAAA-TA
34434 ATAAATA
1 ATAAATA
34441 ATAAA
1 ATAAA
34446 ATTATATTTT
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
7 18 0.75
8 6 0.25
ACGTcount: A:0.68, C:0.00, G:0.00, T:0.32
Consensus pattern (7 bp):
ATAAATA
Found at i:34437 original size:15 final size:14
Alignment explanation
Indices: 34412--34445 Score: 50
Period size: 15 Copynumber: 2.4 Consensus size: 14
34402 CAATCCATTC
*
34412 ATAAATAATAAATT
1 ATAAATAATAAATA
34426 ATAAATTAATAAATA
1 ATAAA-TAATAAATA
34441 ATAAA
1 ATAAA
34446 ATTATATTTT
Statistics
Matches: 18, Mismatches: 1, Indels: 1
0.90 0.05 0.05
Matches are distributed among these distances:
14 5 0.28
15 13 0.72
ACGTcount: A:0.68, C:0.00, G:0.00, T:0.32
Consensus pattern (14 bp):
ATAAATAATAAATA
Found at i:37725 original size:23 final size:25
Alignment explanation
Indices: 37699--37745 Score: 62
Period size: 25 Copynumber: 2.0 Consensus size: 25
37689 TACTAAATCC
*
37699 ATTTATTT-ATT-ATTTATATAGTT
1 ATTTATTTCATTCATATATATAGTT
*
37722 ATTTTTTTCATTCATATATATAGT
1 ATTTATTTCATTCATATATATAGT
37746 GGACCCGCCC
Statistics
Matches: 20, Mismatches: 2, Indels: 2
0.83 0.08 0.08
Matches are distributed among these distances:
23 7 0.35
24 3 0.15
25 10 0.50
ACGTcount: A:0.30, C:0.04, G:0.04, T:0.62
Consensus pattern (25 bp):
ATTTATTTCATTCATATATATAGTT
Found at i:38338 original size:24 final size:24
Alignment explanation
Indices: 38306--38353 Score: 96
Period size: 24 Copynumber: 2.0 Consensus size: 24
38296 ATATTATAAG
38306 TATATAAATAATCAACACTACCAC
1 TATATAAATAATCAACACTACCAC
38330 TATATAAATAATCAACACTACCAC
1 TATATAAATAATCAACACTACCAC
38354 AAAGAGCTAC
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
24 24 1.00
ACGTcount: A:0.50, C:0.25, G:0.00, T:0.25
Consensus pattern (24 bp):
TATATAAATAATCAACACTACCAC
Found at i:42449 original size:14 final size:13
Alignment explanation
Indices: 42424--42457 Score: 52
Period size: 13 Copynumber: 2.6 Consensus size: 13
42414 TTCAAGGTTT
42424 AAGTTTAGATTTG
1 AAGTTTAGATTTG
42437 AAGTTTGAGATTTG
1 AAGTTT-AGATTTG
42451 -AGTTTAG
1 AAGTTTAG
42458 GGTTTAGGAT
Statistics
Matches: 20, Mismatches: 0, Indels: 3
0.87 0.00 0.13
Matches are distributed among these distances:
12 2 0.10
13 11 0.55
14 7 0.35
ACGTcount: A:0.29, C:0.00, G:0.26, T:0.44
Consensus pattern (13 bp):
AAGTTTAGATTTG
Found at i:45489 original size:6 final size:6
Alignment explanation
Indices: 45478--45507 Score: 60
Period size: 6 Copynumber: 5.0 Consensus size: 6
45468 AAAAGGGGTT
45478 GGGATG GGGATG GGGATG GGGATG GGGATG
1 GGGATG GGGATG GGGATG GGGATG GGGATG
45508 AGGTTTAAGA
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
6 24 1.00
ACGTcount: A:0.17, C:0.00, G:0.67, T:0.17
Consensus pattern (6 bp):
GGGATG
Done.