Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014231.1 Kokia drynarioides strain JFW-HI SEQ_129264, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  129651

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10093--10228
69
2.0
66
88
6
204
38
19
5
36
1.74
13613--13663
16
3.1
16
71
23
52
62
3
5
27
1.36
17038--17062
13
1.9
13
100
0
50
24
20
8
48
1.76
19731--20206
168
2.8
168
90
1
731
34
26
15
23
1.95
25187--25220
15
2.3
15
89
0
50
73
5
0
20
1.04
29059--29092
18
2.0
17
88
11
52
61
0
0
38
0.96
29200--29283
42
2.0
42
100
0
168
40
26
7
26
1.81
34765--34820
22
2.6
22
76
18
64
60
0
0
39
0.97
38406--38508
52
2.0
52
96
0
188
24
9
11
54
1.66
40230--40268
19
2.1
19
90
0
60
43
0
2
53
1.14
40239--40277
18
2.2
18
85
0
51
48
0
0
51
1.00
40283--40323
19
2.2
19
86
0
55
36
0
7
56
1.27
41904--41944
7
5.9
7
97
0
64
21
14
34
29
1.93
50479--50516
7
5.6
7
96
3
69
44
23
0
31
1.54
55508--55553
17
2.4
19
86
13
60
47
2
2
47
1.26
62640--62673
13
2.6
13
90
0
59
44
5
14
35
1.70
65276--65332
30
1.9
30
82
13
73
49
3
0
47
1.18
66211--66420
110
1.9
108
84
4
280
20
11
17
50
1.77
72884--72960
38
2.0
38
100
0
154
23
15
15
45
1.84
79972--80049
31
2.5
30
83
8
84
35
0
3
60
1.15
80021--80095
20
3.8
19
75
10
71
33
0
5
61
1.19
81891--81976
25
3.5
24
73
18
70
45
2
0
52
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93278--93306
11
2.5
12
88
11
51
51
0
0
48
1.00
93247--93314
29
2.3
30
79
16
81
51
0
0
48
1.00
93693--93758
16
4.7
15
71
24
54
53
1
0
45
1.09
93693--93753
20
3.1
19
71
15
61
50
1
0
47
1.10
103625--103663
18
2.2
18
95
0
69
35
0
7
56
1.28
109515--109564
17
2.9
17
78
21
59
36
2
2
60
1.20
109668--109698
15
2.1
15
100
0
62
22
0
0
77
0.77
116850--116988
59
2.3
59
79
6
147
23
11
12
52
1.71
117228--117287
30
2.0
31
83
9
79
46
5
16
31
1.69
118916--118941
13
2.0
13
100
0
52
61
0
0
38
0.96
122772--122939
43
3.9
44
82
4
175
29
27
16
26
1.96
122970--122998
15
1.9
15
100
0
58
48
27
0
24
1.51
124345--124404
33
1.9
32
86
10
88
56
3
33
6
1.42
127192--127412
43
5.2
43
78
5
187
31
24
16
27
1.96
129216--129261
20
2.3
20
96
0
83
58
0
39
2
1.10
129204--129258
24
2.2
24
81
15
60
60
0
38
1
1.08

Tables:   1

The End!