Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014270.1 Kokia drynarioides strain JFW-HI SEQ_129303, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  126680

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1714--1775
30
1.9
33
81
12
76
24
14
6
54
1.63
22021--22061
21
2.0
21
90
4
66
34
0
0
65
0.93
22033--22089
28
2.1
27
83
3
69
50
0
0
49
1.00
22182--22216
18
1.9
18
88
11
54
40
0
8
51
1.33
23101--23192
39
2.3
39
78
14
91
47
1
1
50
1.15
28588--28674
40
2.2
40
97
0
165
20
12
25
41
1.88
29732--29779
21
2.3
21
85
7
62
47
4
6
41
1.48
30910--30980
31
2.3
31
82
0
88
38
12
8
40
1.74
34283--34407
63
2.0
63
91
0
205
29
21
20
28
1.98
37154--37183
2
15.0
2
100
0
60
50
0
0
50
1.00
38415--38462
23
2.1
22
82
17
55
50
4
6
39
1.47
42627--42674
25
1.9
25
86
0
69
45
20
8
25
1.79
44467--44735
49
5.6
49
77
8
210
24
25
17
32
1.97
44473--44708
48
4.8
48
80
3
220
25
27
15
32
1.95
46302--46326
9
2.8
9
100
0
50
52
0
0
48
1.00
46527--46566
21
2.0
20
85
14
55
55
0
0
45
0.99
46910--46934
2
12.5
2
100
0
50
48
0
0
52
1.00
46970--47032
26
2.5
26
84
2
83
25
3
1
69
1.12
52154--52214
29
2.1
29
84
3
77
27
1
4
65
1.22
52587--52618
12
2.6
12
95
5
55
53
3
21
21
1.60
52708--52771
32
2.0
32
93
0
110
39
14
28
18
1.90
53071--53109
20
2.0
20
89
0
60
23
5
7
64
1.40
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58308--58353
21
2.2
20
81
11
58
28
0
19
52
1.47
72814--72839
12
2.2
12
100
0
52
53
34
0
11
1.37
81623--81652
15
1.9
16
93
6
53
63
3
0
33
1.11
84816--84859
22
2.0
22
86
0
61
34
2
4
59
1.30
87038--87068
15
2.1
14
94
5
53
0
9
0
90
0.46
96032--96058
11
2.5
11
100
0
54
0
7
0
92
0.38
106698--106795
6
16.5
6
69
14
69
40
4
1
54
1.26
106698--106806
17
6.2
17
79
13
105
41
3
1
53
1.29
106698--106780
37
2.3
35
89
8
123
38
3
1
56
1.24
106765--106810
23
2.0
23
82
0
56
52
2
2
43
1.25
107558--107622
34
1.9
34
84
6
87
53
0
4
41
1.21
108685--108740
25
2.2
25
84
6
69
32
25
1
41
1.66
108670--108923
30
8.8
29
72
15
120
35
23
2
38
1.68
108818--109074
59
4.4
59
79
9
233
33
24
4
37
1.76
108744--108984
30
8.1
29
73
13
145
35
24
2
37
1.69
108822--109130
59
5.2
58
76
7
230
32
22
5
38
1.78
115070--115101
17
1.9
17
93
6
57
56
0
0
43
0.99
122310--122346
19
2.0
19
89
5
58
37
0
5
56
1.22
123827--123854
2
14.0
2
100
0
56
50
0
0
50
1.00
124130--124161
2
16.0
2
100
0
64
50
0
0
50
1.00

Tables:   1

The End!