Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014273.1 Kokia drynarioides strain JFW-HI SEQ_129306, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  147604

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11051--11075
2
12.5
2
100
0
50
52
0
0
48
1.00
18014--18055
19
2.2
19
100
0
84
35
4
21
38
1.75
19360--19419
12
5.1
12
86
11
79
65
1
0
33
1.03
19360--19419
11
5.2
11
79
16
59
65
1
0
33
1.03
27353--27398
24
1.9
24
82
8
58
15
8
6
69
1.34
29146--29204
21
2.7
21
82
12
66
74
0
23
1
0.91
29141--29208
9
7.7
9
74
12
52
72
1
25
1
1.02
29168--29209
20
2.0
20
86
9
57
73
0
23
2
0.94
29173--29309
69
2.0
68
98
0
256
56
9
18
13
1.64
33522--33568
8
5.8
8
78
14
51
40
2
0
57
1.11
34449--34522
38
2.0
37
84
7
96
18
12
22
45
1.83
35097--35155
28
2.1
29
81
9
68
30
5
1
62
1.26
35149--35196
24
2.0
24
87
0
69
41
4
2
52
1.32
35183--35245
20
3.3
19
78
6
65
34
3
4
57
1.36
40879--41324
195
2.3
195
84
4
553
24
26
19
29
1.99
49077--49133
21
2.8
20
76
7
60
43
31
10
14
1.79
54384--54416
17
1.9
17
100
0
66
18
21
12
48
1.80
55002--55270
134
2.0
134
98
0
520
32
9
17
40
1.82
62842--62890
23
2.1
22
82
14
55
46
12
0
40
1.41
63788--63835
15
3.4
14
83
11
62
54
4
0
41
1.20
64366--64416
25
2.0
27
85
14
72
45
0
0
54
0.99
74791--74826
14
2.6
14
95
0
63
5
22
8
63
1.43
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76302--76340
16
2.4
16
87
12
62
64
0
0
35
0.94
76301--76359
23
2.5
23
86
8
75
66
0
0
33
0.92
76306--76346
16
2.9
14
83
16
57
60
0
0
39
0.96
80832--80879
22
2.2
22
92
0
78
45
8
14
31
1.74
94103--94148
19
2.4
19
92
0
74
26
23
19
30
1.98
97208--97250
9
4.8
9
81
18
54
74
0
2
23
0.93
97211--97244
16
2.1
17
94
5
61
73
0
2
23
0.97
100882--100915
17
2.0
17
100
0
68
17
47
17
17
1.84
102812--102864
21
2.5
21
81
0
61
32
24
15
28
1.95
103555--103654
36
2.8
36
82
0
110
22
24
19
35
1.96
105194--105258
22
2.9
22
83
2
76
15
26
16
41
1.88
109603--109633
16
1.9
16
100
0
62
58
12
0
29
1.35
114561--114592
15
2.1
15
100
0
64
6
6
40
46
1.54
117578--117638
26
2.3
26
100
0
122
29
54
0
16
1.43
117904--117942
2
19.5
2
94
0
69
51
0
48
0
1.00
135030--135061
3
10.7
3
100
0
64
68
0
0
31
0.90
135345--135383
20
2.0
20
89
0
60
46
17
28
7
1.76
140087--140162
11
6.8
11
70
24
52
55
1
1
42
1.16
140414--140453
19
2.1
19
85
0
53
32
2
5
60
1.32

Tables:   1

The End!