Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014288.1 Kokia drynarioides strain JFW-HI SEQ_129322, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  137724

Tables:   1   

This is table  1  of  1  ( 52 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14--62
25
1.9
26
84
12
66
22
2
10
65
1.34
5232--5279
24
1.9
26
84
16
66
45
0
22
31
1.53
5342--5418
23
3.3
23
90
0
118
9
27
20
42
1.82
5407--5485
23
3.5
23
82
3
97
13
21
26
37
1.91
5995--6060
32
2.1
32
94
0
114
27
33
6
33
1.81
8357--8390
18
1.9
18
88
5
52
29
0
5
64
1.17
14573--14649
41
1.9
40
81
7
93
63
0
0
36
0.95
23591--23648
31
1.9
31
85
3
82
18
5
10
65
1.41
30301--30353
28
1.9
27
85
11
72
47
3
0
49
1.19
42402--42509
54
2.0
54
94
0
189
34
20
8
37
1.83
48795--48907
45
2.5
44
83
8
138
26
15
15
42
1.87
56046--56089
21
2.1
21
95
0
79
43
25
0
31
1.55
65781--65826
16
2.8
16
86
3
56
60
17
0
21
1.35
65927--65996
35
2.0
35
97
0
131
38
17
14
30
1.89
67397--67447
26
2.0
26
92
0
84
23
13
25
37
1.92
68679--68746
27
2.5
26
76
11
66
38
2
0
58
1.13
73112--73192
4
20.0
4
85
1
72
34
2
23
39
1.68
73419--73863
219
2.0
220
96
0
820
27
20
18
33
1.96
75294--75323
14
2.1
14
100
0
60
30
23
13
33
1.93
77731--77799
24
2.9
24
95
0
120
31
13
30
24
1.93
81868--81929
24
2.6
24
79
2
72
51
9
12
25
1.70
83836--83894
24
2.5
24
82
0
73
49
6
11
32
1.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88523--88595
30
2.5
28
84
8
92
27
35
12
24
1.91
89353--89383
12
2.6
12
94
0
53
16
19
16
48
1.81
90874--90927
21
2.5
20
74
11
54
46
12
18
22
1.83
96267--96330
16
4.1
16
79
4
67
51
3
3
42
1.33
96374--96415
21
2.0
21
90
0
66
52
0
0
47
1.00
97369--97412
2
22.0
2
95
0
79
52
0
0
47
1.00
101649--101698
20
2.5
20
83
9
57
44
0
12
44
1.41
108998--109045
19
2.5
19
79
0
51
66
2
0
31
1.03
109019--109057
19
2.0
20
85
5
53
61
0
2
35
1.10
109017--109078
27
2.3
28
84
15
87
59
1
3
35
1.23
109077--109149
10
7.3
10
71
11
51
63
0
5
31
1.17
109060--109121
21
2.8
21
77
22
65
61
1
6
30
1.31
109078--109169
29
3.1
28
76
18
98
60
0
7
31
1.24
109152--109189
19
2.0
20
89
5
60
65
2
7
23
1.32
109152--109204
20
2.7
19
85
5
61
67
1
5
24
1.22
109174--109204
10
3.1
10
100
0
62
77
0
0
22
0.77
110897--110940
20
2.2
20
84
8
54
47
2
29
20
1.62
115108--115142
18
1.9
18
100
0
70
62
17
0
20
1.32
114902--115651
374
2.0
374
96
0
1376
43
8
10
37
1.70
122887--122930
21
2.0
22
86
4
63
34
15
0
50
1.45
130446--130533
44
2.0
44
100
0
176
25
6
38
29
1.81
133976--134048
20
3.4
20
66
23
58
54
0
5
39
1.23
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
133952--134053
45
2.3
45
100
0
204
51
0
7
40
1.31
134800--134991
99
2.0
96
81
11
227
50
6
8
34
1.58
135699--135743
21
2.1
21
88
8
65
31
0
0
68
0.89
135698--135746
22
2.3
20
82
10
62
32
0
0
67
0.91
135687--135752
29
2.3
29
84
7
82
39
0
0
60
0.97
136979--137052
17
4.4
17
89
0
112
43
0
2
54
1.14
137003--137054
6
9.0
6
76
23
58
46
0
1
51
1.12
137610--137677
3
22.3
3
86
3
82
57
1
1
39
1.17

Tables:   1

The End!