Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014293.1 Kokia drynarioides strain JFW-HI SEQ_129328, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43242

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3485--3542
29
2.0
29
100
0
116
51
10
10
27
1.68
4707--4745
17
2.3
17
86
0
51
43
0
2
53
1.14
5073--5223
75
2.0
72
86
6
203
45
7
3
43
1.50
5245--5300
24
2.3
25
78
6
60
55
1
5
37
1.33
5397--5442
20
2.3
20
84
0
56
43
13
2
41
1.55
5413--5456
20
2.2
20
83
0
52
36
9
4
50
1.55
7250--7327
39
2.0
39
97
0
147
30
16
10
42
1.82
7450--7510
28
2.1
29
82
8
72
60
3
6
29
1.38
9320--9392
36
2.0
36
97
0
137
49
1
21
27
1.58
11304--11343
21
1.9
21
84
0
53
37
15
20
27
1.92
13326--13381
19
2.8
20
76
13
53
51
1
1
44
1.22
14126--14194
27
2.5
27
79
13
70
37
1
1
59
1.15
16143--16191
18
2.7
18
96
0
89
36
20
4
38
1.72
16598--16627
11
2.6
12
94
5
53
26
0
0
73
0.84
17136--17162
9
3.0
9
100
0
54
33
11
0
55
1.35
18469--18520
21
2.6
20
81
6
61
53
1
11
32
1.48
18648--18705
25
2.3
24
80
13
64
27
8
15
48
1.74
26454--26493
7
5.7
7
100
0
80
40
0
30
30
1.57
28281--28328
16
2.7
18
75
15
55
31
2
0
66
1.03
28282--28328
17
2.8
17
77
9
51
31
2
0
65
1.04
29087--29191
20
4.8
21
72
15
72
7
3
18
70
1.26
29115--29304
10
18.0
10
67
20
54
6
4
17
71
1.23
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29143--29191
20
2.3
21
89
6
73
10
4
14
71
1.27
29139--29249
50
2.2
52
83
3
136
5
3
18
72
1.20
29191--29230
19
2.1
19
85
4
53
2
2
22
72
1.09
29597--29622
6
4.3
6
100
0
52
0
15
69
15
1.20
34163--34190
2
14.0
2
100
0
56
50
0
0
50
1.00
35407--35489
11
7.5
11
74
15
55
32
2
2
62
1.21
35450--35493
23
1.9
23
86
9
63
31
4
4
59
1.38
42572--42843
29
9.3
30
75
15
207
34
3
24
37
1.72
42533--42843
59
5.3
58
82
5
351
34
3
25
36
1.74

Tables:   1

The End!