Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001430.1 Kokia drynarioides strain JFW-HI SEQ_112937, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58451

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10420--10468
17
3.0
17
71
20
50
59
2
0
38
1.09
16376--16501
65
1.9
65
93
0
216
41
12
17
28
1.86
18798--18864
29
2.3
29
100
0
134
32
17
26
22
1.96
19633--19693
20
3.1
19
77
11
61
62
0
0
37
0.96
19643--19700
7
8.4
7
78
16
50
62
1
0
36
1.06
19637--19686
25
1.9
25
88
8
73
66
0
0
34
0.92
19884--19981
37
2.8
33
76
15
92
53
2
3
41
1.28
20056--20097
21
2.0
22
85
4
59
21
7
0
71
1.09
20064--20114
20
2.5
20
81
6
59
21
7
1
68
1.25
20192--20229
17
2.3
17
86
4
51
28
2
2
65
1.19
20279--20338
29
2.0
29
83
3
75
48
11
16
23
1.79
26693--26733
2
20.5
2
89
0
64
2
2
46
48
1.28
28980--29011
16
2.0
16
100
0
64
37
12
18
31
1.88
29762--29825
22
3.2
22
62
25
59
15
7
29
46
1.74
29749--29835
38
2.3
38
100
0
174
11
8
32
48
1.68
34686--35251
281
2.0
281
99
0
1114
30
19
9
39
1.84
35427--35516
21
4.3
20
76
10
92
8
6
17
66
1.40
35522--35573
24
2.2
24
92
0
86
11
5
13
69
1.35
35522--35564
12
3.6
12
80
0
50
9
6
16
67
1.40
35531--35607
12
6.5
12
77
3
66
12
3
12
70
1.31
35531--35607
35
2.2
36
85
2
102
12
3
12
70
1.31
35510--35614
24
4.5
24
75
8
72
10
3
18
67
1.35
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35588--35627
20
2.0
21
90
5
64
10
0
25
65
1.24
35928--35960
14
2.4
14
90
5
50
15
12
0
72
1.12
45049--45075
2
13.5
2
100
0
54
48
0
0
51
1.00
46201--46250
19
2.5
20
83
3
66
64
2
2
32
1.16
46271--46320
21
2.3
22
83
16
61
62
2
2
34
1.18
50576--50631
14
4.1
14
76
17
55
69
12
0
17
1.18
51651--51681
13
2.3
14
94
5
55
67
0
0
32
0.91
52731--52759
3
9.7
3
100
0
58
0
0
34
65
0.93
57556--57590
16
2.2
16
89
0
52
71
0
2
25
1.00

Tables:   1

The End!