Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014318.1 Kokia drynarioides strain JFW-HI SEQ_129355, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  92524

Tables:   1   

This is table  1  of  1  ( 57 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3000--3056
23
2.5
22
83
11
69
22
19
10
47
1.80
4226--4266
19
2.2
19
86
0
55
75
12
0
12
1.05
5742--5766
2
12.5
2
100
0
50
48
52
0
0
1.00
9858--9917
19
3.0
20
80
11
79
35
1
0
63
1.05
9858--9918
10
6.1
10
77
11
63
36
1
0
62
1.05
17722--17765
20
2.3
19
80
4
52
68
2
2
27
1.14
26479--26503
9
2.8
9
100
0
50
12
0
0
88
0.53
26640--26687
24
1.9
26
87
8
73
20
20
25
33
1.97
27919--27966
22
2.2
22
81
7
53
25
4
16
54
1.60
27941--27998
20
3.2
20
70
27
65
27
3
18
50
1.63
27946--28002
18
3.3
18
71
26
59
26
3
21
49
1.65
28006--28046
20
2.0
21
90
4
66
36
7
12
43
1.70
55675--55704
2
15.0
2
92
0
51
46
0
3
50
1.18
58180--58221
21
2.0
21
86
9
59
23
26
4
45
1.73
60235--60300
25
2.6
26
76
9
64
59
0
1
39
1.07
60357--60392
18
2.0
18
88
0
54
52
5
0
41
1.24
60349--60552
106
2.0
103
90
2
318
55
9
4
29
1.52
61982--62059
28
2.7
30
92
8
142
34
10
25
29
1.89
62819--62888
35
2.0
35
100
0
140
20
22
11
45
1.82
67416--67457
21
2.0
22
85
4
59
64
4
19
11
1.44
70314--70352
20
1.9
21
94
5
71
23
25
5
46
1.73
71981--72203
60
3.8
59
82
7
272
33
4
26
36
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72127--72465
88
3.9
88
79
9
275
39
1
24
34
1.63
72128--72476
117
3.0
115
81
7
375
39
1
24
34
1.63
72126--72506
29
13.0
29
78
8
294
38
1
24
35
1.64
72102--72507
30
13.8
29
74
10
253
38
1
24
35
1.66
72403--72535
30
4.5
29
70
16
96
36
1
22
39
1.64
74128--74170
11
3.8
11
87
6
59
58
2
0
39
1.11
74144--74188
17
2.6
18
92
3
74
57
2
2
37
1.23
74125--74175
23
2.2
23
89
0
66
52
5
0
41
1.25
74123--74172
6
8.5
6
80
10
59
52
4
0
44
1.20
74150--74217
29
2.4
28
83
11
77
58
5
1
33
1.31
74834--74887
26
2.1
26
89
0
81
18
31
29
20
1.96
74871--75098
39
5.8
39
70
3
163
25
19
31
24
1.98
74862--75100
78
3.1
76
83
4
289
24
18
31
25
1.98
75383--76094
49
14.7
49
77
9
552
20
25
15
37
1.92
75383--76084
98
7.2
98
75
8
616
20
25
15
38
1.92
77037--77130
6
14.3
6
77
16
71
1
21
1
76
0.91
77037--77130
13
7.2
12
78
11
71
1
21
1
76
0.91
77080--77122
3
14.7
3
85
4
61
0
25
0
74
0.82
77499--77986
244
2.0
244
98
0
949
21
19
20
39
1.93
81805--82085
59
4.8
60
82
6
290
36
3
23
35
1.74
81805--82400
29
20.1
29
75
12
348
38
2
23
35
1.70
81805--82203
118
3.4
118
79
12
326
38
2
23
35
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
81865--82389
59
8.9
59
85
4
487
39
2
22
35
1.67
81805--82401
30
20.2
30
74
12
362
38
2
23
35
1.69
83745--83792
20
2.4
20
96
0
87
12
14
37
35
1.84
83980--84065
17
5.0
17
86
9
95
54
6
1
37
1.35
83989--84093
6
18.2
6
66
14
60
55
4
1
38
1.32
83980--84065
34
2.5
34
86
5
111
54
6
1
37
1.35
83989--84065
17
4.4
17
90
3
109
55
5
1
37
1.30
84027--84094
29
2.4
29
87
7
95
57
2
2
36
1.29
84541--84591
24
2.2
23
85
3
66
74
3
3
17
1.12
88152--88199
24
2.0
24
83
0
60
33
20
20
25
1.97
90677--90719
22
2.0
22
90
4
70
23
13
6
55
1.62
91257--91295
17
2.2
17
86
4
51
2
20
7
69
1.26
91932--91971
21
2.0
21
90
5
64
25
15
15
45
1.84

Tables:   1

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