Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014346.1 Kokia drynarioides strain JFW-HI SEQ_129383, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  106655

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5107--5344
52
4.6
52
84
2
280
33
25
14
27
1.94
5107--5344
105
2.3
104
83
3
282
33
25
14
27
1.94
11392--11421
14
2.1
15
93
6
53
23
23
6
46
1.75
12339--12472
52
2.6
51
83
3
162
34
23
16
26
1.95
15182--15225
23
1.9
23
86
9
63
25
9
0
65
1.21
15193--15229
14
2.6
14
86
4
56
27
8
0
64
1.21
20001--20034
5
6.8
5
90
9
52
64
0
0
35
0.94
19997--20034
10
3.6
11
93
6
62
63
0
0
36
0.95
19997--20032
16
2.3
15
95
4
63
63
0
0
36
0.94
21218--21268
22
2.5
21
79
17
54
41
1
1
54
1.22
22817--22865
26
2.0
25
85
14
68
48
20
2
28
1.60
24996--25058
29
2.2
29
100
0
126
33
20
19
26
1.96
38511--38576
21
3.0
21
74
8
60
40
6
7
45
1.57
54252--54298
25
1.9
24
82
4
58
42
4
0
53
1.20
55673--55736
32
2.0
32
96
0
119
37
10
3
48
1.54
61145--61192
2
24.0
2
91
0
78
54
45
0
0
0.99
61486--61515
2
15.0
2
100
0
60
50
0
50
0
1.00
62093--62140
15
3.3
15
82
5
62
58
2
2
37
1.22
63282--63322
18
2.5
15
85
14
55
41
4
12
41
1.64
63343--63385
18
2.4
17
80
7
50
37
9
0
53
1.33
64759--64829
21
3.2
21
64
21
54
28
4
18
49
1.66
64745--64837
46
2.0
46
100
0
186
27
7
17
47
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68383--68471
43
2.1
43
91
0
142
23
13
29
33
1.93
69495--69562
15
4.4
15
74
18
59
45
0
1
52
1.09
69492--69606
49
2.3
49
81
14
132
47
0
2
48
1.21
69577--69609
13
2.4
14
85
10
50
51
0
0
48
1.00
85951--86008
16
3.7
16
71
17
50
50
1
6
41
1.39
88813--88862
24
2.1
24
88
7
75
24
30
0
46
1.53
94243--94309
34
1.9
33
82
14
82
68
8
11
10
1.39
95466--95644
90
2.0
90
80
8
204
38
18
7
35
1.79
95665--95733
18
3.8
18
74
14
70
60
0
1
37
1.06
95786--95831
20
2.3
20
81
7
58
58
4
2
34
1.30
95786--95831
19
2.3
20
85
3
58
58
4
2
34
1.30
95981--96037
19
2.8
21
78
10
64
31
7
0
61
1.23
96074--96118
19
2.4
18
82
10
54
35
4
2
57
1.31
96208--96389
89
2.1
89
86
3
242
37
9
18
34
1.83
96836--96882
23
2.0
23
100
0
94
29
27
17
25
1.97
98920--98976
29
2.0
29
89
3
89
36
5
7
50
1.52
102911--102949
17
2.3
17
86
0
51
17
12
23
46
1.83
106085--106125
22
1.9
22
90
5
66
68
0
0
31
0.90

Tables:   1

The End!