Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014351.1 Kokia drynarioides strain JFW-HI SEQ_129388, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79493

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1125--1170
21
2.2
21
84
7
58
30
28
10
30
1.91
1816--2168
53
6.7
53
83
2
397
33
22
16
27
1.95
2617--2660
16
2.9
15
80
6
52
31
18
4
45
1.69
2629--2660
16
2.0
16
93
0
55
25
18
3
53
1.59
4405--4600
26
7.8
25
69
8
112
40
17
23
17
1.90
4401--4699
50
6.0
50
83
0
355
38
18
24
19
1.93
4432--4523
24
3.8
24
75
5
94
40
19
23
16
1.91
5972--6054
30
2.6
33
86
11
136
32
12
31
24
1.91
11693--11762
30
2.3
30
82
4
79
24
18
22
34
1.96
15954--15990
3
12.3
3
88
0
56
2
29
2
64
1.21
17678--20905
215
15.3
215
77
8
2692
39
14
17
27
1.89
18495--51920
417
79.5
417
77
9
26028
40
14
17
28
1.88
20735--21107
190
2.0
189
80
5
432
38
12
17
31
1.87
25197--31431
215
29.6
215
76
8
5014
40
14
17
27
1.89
21036--51944
216
146.9
209
74
10
7606
39
14
17
28
1.88
30621--30665
21
2.2
21
84
7
58
33
11
15
40
1.83
31477--51947
216
97.1
215
77
9
14441
39
14
17
28
1.88
60443--60475
14
2.4
14
100
0
66
6
27
21
45
1.75
63094--63137
15
2.8
16
77
19
56
2
31
0
65
1.05
63124--63158
11
3.2
11
95
0
61
5
34
0
60
1.21
63123--63173
22
2.3
22
80
6
59
5
31
1
60
1.31
63162--63209
21
2.3
20
86
10
62
6
16
0
77
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63162--63209
20
2.3
21
85
3
62
6
16
0
77
0.97
63976--64196
111
2.0
110
99
0
424
17
22
26
33
1.95
70537--70566
13
2.2
13
94
5
51
0
13
0
86
0.57
70537--70566
7
4.4
7
91
8
53
0
13
0
86
0.57
74426--74524
39
2.5
39
90
0
153
51
16
7
25
1.69
76689--79491
216
13.0
215
80
4
2881
40
15
16
28
1.88
76689--79492
431
6.5
431
80
5
2881
40
15
16
27
1.88
76688--79491
647
4.3
645
81
4
2808
40
15
16
27
1.88

Tables:   1

The End!