Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014358.1 Kokia drynarioides strain JFW-HI SEQ_129395, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74361

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3532--3693
86
1.9
85
82
6
202
40
2
24
33
1.68
3655--3783
59
2.2
59
87
1
179
37
5
24
33
1.78
3586--3985
29
13.9
28
72
14
248
35
4
26
33
1.76
3827--3975
55
2.6
55
82
8
183
33
5
26
34
1.79
3886--4005
29
4.2
29
80
7
120
34
4
23
38
1.74
3894--4014
58
2.1
58
82
3
145
37
4
23
35
1.74
5640--5705
17
3.8
17
90
6
96
56
3
3
37
1.30
5640--5711
6
12.2
6
75
7
67
55
2
2
38
1.29
5656--5705
18
2.8
18
96
3
93
60
0
4
36
1.16
5626--5705
17
4.6
17
82
13
83
53
5
3
37
1.41
9299--9345
18
2.6
17
83
16
60
4
12
2
80
0.94
9307--9374
16
4.2
16
69
0
64
5
11
0
82
0.83
11534--11587
23
2.3
23
83
0
63
29
24
18
27
1.98
18492--18521
16
1.9
15
93
6
51
60
16
0
23
1.36
21804--21851
23
2.1
23
92
0
78
29
25
22
22
1.99
22594--22628
17
2.1
17
88
0
52
37
0
5
57
1.23
26716--26793
29
2.8
28
75
7
86
39
7
23
29
1.82
26871--27026
29
5.3
30
71
16
96
34
5
23
37
1.77
48181--48230
23
2.2
23
92
0
82
20
26
26
28
1.99
49908--49983
23
3.4
21
75
12
71
72
1
1
25
1.00
49886--49985
37
2.7
39
75
12
102
71
4
1
24
1.10
54289--54344
23
2.4
23
85
8
78
28
25
23
23
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55829--55873
23
2.0
23
91
8
74
57
8
11
22
1.60
72635--72664
13
2.2
14
94
5
53
16
0
0
83
0.65
72667--72699
15
2.4
14
90
10
50
27
3
0
69
1.03
72667--72700
14
2.3
15
85
5
52
26
2
0
70
1.01
72640--72700
13
4.5
13
76
13
52
22
3
1
72
1.09

Tables:   1

The End!