Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014368.1 Kokia drynarioides strain JFW-HI SEQ_129405, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  133989

Tables:   1   

This is table  1  of  1  ( 57 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6704--6738
14
2.4
14
90
4
52
74
2
0
22
0.95
9863--9902
15
2.7
15
92
0
62
67
12
0
20
1.22
9868--9904
9
4.1
9
89
0
56
67
10
0
21
1.21
10121--10162
15
2.7
16
85
14
61
33
0
0
66
0.92
16249--16286
16
2.4
16
86
8
51
34
7
39
18
1.80
17716--17752
18
2.1
18
89
0
56
24
27
0
48
1.51
22289--22389
28
3.7
25
76
18
94
31
2
0
64
1.15
22289--22389
29
3.6
27
79
12
107
31
2
0
64
1.15
22326--22399
38
1.9
39
89
8
116
35
2
0
62
1.10
22271--22399
28
4.7
27
71
20
81
33
3
0
62
1.16
32142--32195
20
2.8
20
78
18
60
31
0
7
61
1.24
32143--32193
9
5.4
9
76
17
50
29
0
7
62
1.23
32453--32478
13
2.0
13
100
0
52
38
7
30
23
1.83
38560--38611
9
5.8
9
74
17
54
21
1
1
75
1.00
38560--38598
19
2.1
18
90
4
60
20
2
0
76
0.90
38573--38611
13
2.9
14
88
11
55
20
0
2
76
0.90
38585--38644
15
3.9
14
75
20
50
20
5
6
68
1.32
38780--38826
23
2.0
23
88
8
69
21
0
2
76
0.89
39803--39857
25
2.2
25
87
9
76
9
7
10
72
1.27
39914--39954
22
1.9
22
90
5
66
12
4
9
73
1.24
39919--40007
12
7.8
12
71
10
62
10
2
15
71
1.22
39979--40021
20
2.1
21
91
4
70
6
0
23
69
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40933--40980
25
1.9
25
86
0
69
56
0
4
39
1.19
40987--41165
99
1.8
99
83
1
243
30
5
5
58
1.42
41162--41199
20
2.0
20
89
5
60
55
0
0
44
0.99
41174--41214
15
2.8
15
75
17
50
60
0
0
39
0.96
45794--45832
20
2.0
20
94
0
69
43
10
17
28
1.82
49758--49811
16
3.4
16
89
0
81
51
1
14
31
1.53
50827--50877
21
2.4
21
86
0
75
56
11
3
27
1.52
57672--57706
18
1.9
18
88
0
52
28
8
14
48
1.73
61596--61674
3
26.0
3
89
2
50
18
0
13
67
1.24
61596--61669
9
8.2
9
89
0
67
17
0
14
67
1.23
85131--85161
16
1.9
16
93
0
53
61
3
12
22
1.46
85882--86040
55
2.9
54
74
1
147
30
18
22
28
1.97
94614--94675
28
2.2
28
85
5
90
25
9
30
33
1.88
94626--94701
28
2.7
28
84
8
84
28
6
34
30
1.83
94771--94856
29
3.0
28
68
19
68
38
1
25
34
1.64
94785--95058
29
9.4
29
68
12
150
40
2
24
32
1.70
94655--95053
58
6.8
58
76
7
312
37
5
25
32
1.78
94716--95059
117
2.9
115
81
8
329
38
4
24
32
1.74
96519--96547
6
4.8
6
100
0
58
68
0
0
31
0.89
98671--98704
15
2.2
16
89
5
52
67
0
32
0
0.91
99419--99453
17
2.1
17
94
0
61
17
14
20
48
1.81
99769--99807
19
2.0
20
90
5
62
74
2
7
15
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
99769--99809
20
2.0
20
85
4
55
73
2
7
17
1.17
104420--104460
17
2.4
17
87
0
55
46
7
26
19
1.76
111986--112366
29
13.0
27
72
17
103
34
2
26
36
1.71
112052--112356
59
5.2
57
76
12
251
33
3
26
36
1.73
111981--112365
30
13.1
29
75
13
240
34
2
26
36
1.71
117357--117497
56
2.5
56
86
2
194
37
21
8
32
1.84
120868--120897
12
2.5
12
94
0
51
30
0
20
50
1.49
127964--128239
137
2.0
137
97
0
516
18
18
18
44
1.87
131129--131198
31
2.3
30
82
4
79
42
14
7
35
1.73
132814--132874
22
2.7
23
80
12
74
52
0
1
45
1.10
132848--132911
31
2.1
29
85
5
83
45
3
3
48
1.34
133886--133937
6
9.0
6
76
23
58
48
0
0
51
1.00
133868--133935
17
4.1
17
88
1
93
41
0
1
57
1.08

Tables:   1

The End!