Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014369.1 Kokia drynarioides strain JFW-HI SEQ_129406, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29057

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21--143
39
3.2
39
75
4
131
24
31
19
24
1.98
621--663
18
2.4
17
88
7
59
39
0
4
55
1.20
593--677
17
5.3
17
72
17
56
38
1
7
52
1.36
593--694
46
2.2
46
82
6
118
39
0
5
53
1.32
1305--1333
3
9.7
3
100
0
58
68
0
0
31
0.89
2196--2275
29
2.7
30
78
7
83
41
25
2
31
1.68
2196--2284
30
3.0
30
78
6
83
39
24
3
32
1.72
2267--2885
29
21.2
28
71
13
289
35
26
5
33
1.78
2268--2719
59
7.8
57
72
12
282
36
25
4
34
1.76
2497--2754
59
4.4
59
78
12
262
37
23
2
35
1.69
2426--2755
88
3.8
87
72
12
253
36
24
3
35
1.74
4952--4985
17
2.0
17
88
0
50
64
5
5
23
1.38
5644--5701
23
2.5
23
82
0
80
25
18
24
31
1.98
6380--6425
19
2.3
21
85
7
60
2
19
0
78
0.86
22305--22393
44
2.0
44
100
0
178
35
17
15
30
1.92
25839--25881
5
8.2
5
82
10
50
25
4
0
69
1.07
25829--25886
17
3.5
17
72
11
57
25
5
1
67
1.21
27711--27756
25
1.9
25
86
8
69
34
4
6
54
1.46

Tables:   1

The End!