Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014375.1 Kokia drynarioides strain JFW-HI SEQ_129413, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  137982

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2982--3020
19
2.0
20
85
9
55
61
0
2
35
1.10
7109--7148
15
2.8
14
81
7
53
5
17
0
77
0.94
14078--14173
28
3.5
28
73
12
81
42
0
13
43
1.44
15465--15513
24
1.9
27
84
12
68
44
8
4
42
1.53
16342--16382
18
2.3
19
79
12
50
39
2
0
58
1.11
18748--18780
2
16.5
2
100
0
66
51
0
0
48
1.00
21204--21645
218
2.0
218
95
0
794
28
17
14
39
1.90
25298--25370
28
2.6
28
93
0
128
10
20
10
57
1.63
42825--42876
23
2.3
23
82
0
59
51
5
1
40
1.37
49484--49525
21
2.0
21
86
9
59
54
0
2
42
1.13
51706--51740
15
2.2
16
90
5
54
37
0
0
62
0.95
54179--54226
23
2.1
23
84
0
60
77
4
0
18
0.93
56575--56615
10
4.2
10
82
14
50
26
0
2
70
0.99
56575--56619
19
2.4
20
82
14
60
26
0
2
71
0.98
60510--60543
18
1.9
18
88
5
52
35
2
5
55
1.39
60769--60832
31
2.1
31
91
2
103
54
0
3
42
1.16
66422--66478
30
1.9
29
85
3
78
56
3
5
35
1.39
72051--72088
13
2.9
13
88
11
60
28
2
0
68
1.03
74299--74323
13
1.9
13
100
0
50
36
0
24
40
1.55
81483--81541
11
5.3
11
83
4
64
67
13
3
15
1.35
82837--82882
20
2.2
21
88
3
67
69
4
8
17
1.31
87003--87226
32
7.1
32
93
1
362
37
18
9
33
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
87193--87449
58
4.4
58
90
1
399
33
22
10
33
1.88
88679--88748
35
2.0
35
100
0
140
57
0
37
5
1.23
88682--88739
19
3.2
19
68
22
61
58
0
34
6
1.25
94853--94897
17
2.6
17
86
6
56
55
0
4
40
1.20
94853--94898
18
2.6
17
86
3
56
56
0
4
39
1.19
98280--98346
32
2.1
32
97
0
125
25
10
25
38
1.87
101022--101235
91
2.4
91
95
1
376
40
24
9
25
1.86
102789--102832
21
2.0
23
86
8
65
38
2
0
59
1.10
107297--108005
236
3.0
233
79
6
686
36
20
14
28
1.92
112781--112812
2
16.0
2
93
0
55
50
3
0
46
1.17
130608--130667
31
2.0
30
86
3
84
36
1
15
46
1.55
135691--135737
24
2.0
24
86
0
67
53
4
2
40
1.32
135887--135950
26
2.5
25
84
2
74
34
7
0
57
1.27

Tables:   1

The End!