Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014382.1 Kokia drynarioides strain JFW-HI SEQ_129420, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63793

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
906--950
12
3.7
12
88
5
63
26
11
15
46
1.79
1567--1613
20
2.3
20
78
7
51
51
2
0
46
1.13
4028--4108
23
3.5
22
76
5
72
12
22
19
45
1.83
4092--4149
22
2.6
22
77
2
62
13
22
25
37
1.91
5673--5806
57
2.3
57
83
8
164
35
18
8
38
1.81
5833--5995
61
2.8
58
81
7
186
42
12
12
32
1.79
20288--20332
20
2.1
22
88
12
67
33
6
0
60
1.23
25795--25865
33
2.2
33
81
0
79
47
9
11
30
1.72
26373--26411
4
9.8
4
83
10
53
76
0
23
0
0.78
26373--26413
21
2.0
20
90
4
64
75
0
24
0
0.80
26377--26410
17
1.9
17
94
5
59
76
0
23
0
0.79
26796--26838
21
2.1
21
91
4
70
27
2
13
55
1.51
27098--27147
16
3.2
16
71
21
52
60
6
0
34
1.21
28458--28550
43
2.2
42
82
5
107
32
10
9
47
1.71
29110--29247
45
3.0
45
82
1
168
33
27
19
19
1.96
29504--29581
28
2.8
28
86
3
95
44
24
6
24
1.77
32848--32913
4
16.2
4
80
9
71
0
31
1
66
1.01
32852--32894
17
2.7
15
80
13
50
0
34
2
62
1.08
32858--32914
21
2.7
21
79
15
64
0
31
1
66
1.02
32847--32913
25
2.7
24
77
11
73
0
32
1
65
1.02
33038--33104
32
2.1
32
97
0
125
31
28
29
10
1.90
35533--35627
29
3.2
29
81
3
100
37
17
12
31
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40714--40751
18
2.1
18
85
9
51
28
15
28
26
1.96
41635--41661
2
13.5
2
100
0
54
48
0
0
51
1.00
51250--51289
17
2.4
17
91
0
62
27
0
12
60
1.33
53443--53516
32
2.3
31
90
6
121
39
2
5
52
1.38
59512--59536
12
2.1
12
100
0
50
56
0
16
28
1.41
62009--62333
58
5.5
58
80
7
325
30
3
28
37
1.74
62016--62333
29
10.9
28
70
18
188
30
3
28
37
1.74
63453--63492
18
2.3
17
84
16
55
47
0
0
52
1.00

Tables:   1

The End!