Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014383.1 Kokia drynarioides strain JFW-HI SEQ_129421, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  88583

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17912--17975
24
2.7
24
85
4
85
1
45
4
48
1.32
17912--18110
30
6.9
30
77
10
191
2
47
5
45
1.36
17934--18100
6
27.2
6
72
17
80
2
47
3
46
1.33
17912--18191
87
3.3
85
86
8
344
2
45
5
47
1.36
18020--18164
27
5.1
27
74
17
91
2
42
4
50
1.36
17934--18180
117
2.1
116
81
9
290
2
45
4
48
1.34
18116--18180
27
2.4
27
89
0
103
3
41
3
52
1.32
27843--28171
111
2.9
111
90
1
514
33
22
17
26
1.96
35578--35615
19
2.0
19
89
0
58
55
7
2
34
1.43
36556--36585
8
3.8
8
95
0
51
46
0
3
50
1.18
37510--37564
18
3.1
18
83
0
65
65
10
5
18
1.42
40028--40080
26
2.0
26
92
0
88
47
0
1
50
1.12
40008--40057
17
2.9
17
75
0
55
46
0
4
50
1.20
41869--42315
30
15.1
29
77
12
330
36
29
2
31
1.72
41869--42308
59
7.5
59
78
9
375
36
29
2
31
1.72
42163--42275
29
3.9
28
78
11
102
34
27
3
34
1.74
42281--42326
21
2.2
21
96
0
83
30
36
2
30
1.70
42197--42408
108
2.0
108
81
9
254
33
28
3
33
1.75
42306--42439
29
4.5
29
76
11
105
32
23
5
38
1.77
42306--42439
59
2.2
61
83
7
159
32
23
5
38
1.77
45753--45814
19
3.2
18
77
22
56
69
8
22
0
1.14
45752--45808
18
3.0
17
73
24
51
68
7
24
0
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51236--51265
15
2.0
15
100
0
60
40
6
13
40
1.71
52164--52209
22
2.0
23
83
8
58
60
8
6
23
1.49
52638--52671
17
2.1
17
89
10
54
58
0
2
38
1.13
57490--57547
24
2.5
23
78
10
64
50
0
1
48
1.11
57629--57667
18
2.1
19
85
4
53
35
2
2
58
1.25
72793--72849
29
2.0
29
82
6
71
31
5
5
57
1.43

Tables:   1

The End!