Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014386.1 Kokia drynarioides strain JFW-HI SEQ_129424, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33400

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
168--433
29
9.1
29
79
6
268
36
3
27
33
1.72
173--430
59
4.4
57
82
9
270
37
3
25
34
1.72
1287--1311
10
2.5
10
100
0
50
28
0
0
72
0.86
2124--2206
6
14.3
6
68
20
52
53
2
1
43
1.21
2114--2160
24
2.0
23
87
4
67
51
2
2
44
1.25
2127--2206
17
4.6
17
81
7
99
53
2
1
42
1.22
14877--14939
28
2.2
28
85
2
81
23
9
31
34
1.87
15040--15406
29
12.5
29
80
8
341
33
2
26
36
1.72
15000--15406
59
6.9
59
81
7
429
32
3
27
36
1.74
16039--16182
77
1.9
77
89
0
225
11
45
22
20
1.84
16411--16435
10
2.5
10
100
0
50
28
0
0
72
0.86
17243--17292
17
2.9
17
85
8
66
56
2
0
42
1.11
18466--18545
41
2.0
40
90
7
126
38
2
7
51
1.44
19462--19486
6
4.2
6
100
0
50
68
0
0
32
0.90
23689--23751
30
2.1
30
81
3
72
50
6
3
39
1.44
25220--25246
5
5.4
5
100
0
54
59
0
0
40
0.98
27018--27043
3
8.7
3
100
0
52
34
0
0
65
0.93
27540--27583
23
1.9
23
95
0
79
65
0
0
34
0.93
29165--29225
23
2.6
23
73
2
59
65
1
3
29
1.18
30251--30327
39
1.9
39
84
10
102
23
6
5
64
1.37
30927--32582
437
3.8
437
92
2
2664
40
12
13
34
1.81
30927--32582
873
1.9
861
90
2
2663
40
12
13
34
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32657--32748
17
5.4
17
76
13
75
43
2
5
48
1.38
32657--32749
35
2.7
34
82
12
95
44
2
5
48
1.37

Tables:   1

The End!