Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014393.1 Kokia drynarioides strain JFW-HI SEQ_129431, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65812

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8297--8915
201
3.1
198
84
5
754
36
17
22
23
1.95
9819--9867
19
2.6
20
78
12
59
46
4
4
44
1.41
10874--11245
30
12.6
29
76
9
308
31
2
28
36
1.71
10873--11242
59
6.3
59
85
3
442
32
2
28
37
1.71
10864--11245
89
4.3
89
78
8
377
31
3
28
36
1.73
12414--12482
3
23.3
3
82
2
86
36
1
2
59
1.21
13150--13189
19
2.3
17
84
16
55
20
5
15
60
1.53
13204--13350
18
8.4
17
78
7
150
51
2
1
45
1.21
13221--13350
18
7.3
18
83
1
165
52
2
0
44
1.19
13222--13280
11
5.2
11
80
10
66
54
1
1
42
1.20
13221--13281
6
10.5
6
77
13
65
52
1
1
44
1.20
13908--14495
207
2.8
207
93
0
989
19
24
20
34
1.96
15697--15734
17
2.2
17
100
0
76
28
31
18
21
1.97
17535--17580
2
23.0
2
100
0
92
50
0
0
50
1.00
18346--18379
17
2.0
17
88
11
52
61
0
32
5
1.20
24475--24517
8
5.9
8
89
10
58
30
0
0
69
0.88
24857--24894
19
2.0
20
89
5
60
28
2
2
65
1.19
24883--24926
17
2.4
18
81
11
54
34
0
2
63
1.07
24883--24986
9
11.6
9
68
13
63
32
0
2
63
1.16
24902--24954
27
2.0
27
85
7
72
33
0
1
64
1.05
24885--24932
17
2.6
17
83
9
51
31
0
4
64
1.12
24900--24971
29
2.6
27
76
10
65
37
1
1
59
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35822--35861
22
1.9
21
85
10
55
2
12
5
80
0.98
36142--36183
16
2.6
16
76
23
52
35
0
0
64
0.94
36983--37052
23
3.2
23
61
19
58
27
20
8
44
1.80
36976--37074
43
2.3
43
100
0
198
27
22
8
42
1.81
37000--37069
23
3.2
23
62
25
60
27
21
8
42
1.81
40027--40094
23
2.9
23
73
2
64
44
20
10
25
1.83
40193--40237
12
3.8
12
78
0
54
44
20
15
20
1.87
41661--41704
14
2.8
16
80
16
56
47
0
0
52
1.00
41809--41896
29
2.9
30
78
10
90
52
17
11
19
1.74
42607--42676
29
2.4
28
81
9
79
35
0
5
58
1.22
42784--42825
5
8.4
5
82
10
50
54
4
0
40
1.21
44672--44709
12
3.1
12
92
7
67
0
18
0
81
0.69
44677--44709
13
2.5
14
85
14
52
0
18
0
81
0.68
44660--44714
25
2.2
24
81
6
65
0
29
0
70
0.87
44929--44953
10
2.5
10
100
0
50
92
0
0
8
0.40
51734--51781
21
2.3
21
88
0
69
64
10
14
10
1.49
52225--52260
17
2.2
17
90
5
56
50
11
0
38
1.38
56612--56660
22
2.2
23
85
3
64
28
6
2
63
1.30
63359--63385
3
9.0
3
100
0
54
66
0
0
33
0.92
65780--65812
2
16.5
2
100
0
66
51
0
0
48
1.00

Tables:   1

The End!