Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014399.1 Kokia drynarioides strain JFW-HI SEQ_129437, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50290

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3749--3998
61
4.2
60
77
13
262
37
18
20
24
1.94
3698--3999
118
2.5
115
81
10
301
37
17
19
25
1.94
3817--3968
57
2.6
57
80
10
139
36
20
19
23
1.95
5068--5440
29
12.7
29
74
7
216
35
4
24
36
1.74
5068--5440
59
6.4
58
78
8
335
35
4
24
36
1.74
7710--8193
210
2.3
206
84
2
612
23
23
19
34
1.96
8049--8316
123
2.2
122
90
2
423
20
21
23
35
1.96
8112--8630
206
2.5
207
88
2
756
21
21
20
35
1.96
7841--8521
329
2.1
329
88
1
1015
22
21
20
35
1.96
19953--20201
124
2.0
124
96
0
462
28
17
20
33
1.95
20498--20573
36
2.1
36
95
0
134
36
14
23
25
1.93
25995--26162
58
2.9
58
81
7
198
44
2
1
52
1.21
26318--26357
16
2.5
17
88
12
66
27
27
7
37
1.84
29204--29233
14
2.1
14
93
0
51
30
16
10
43
1.81
29431--29474
6
7.3
6
86
0
61
0
61
2
36
1.09
30813--30892
30
2.7
30
92
0
124
25
21
26
27
1.99
38762--38847
42
2.0
42
97
0
163
30
17
18
33
1.94
41116--41161
18
2.6
18
100
0
92
60
4
13
21
1.49
43352--43776
59
7.3
56
75
9
232
35
6
24
34
1.81
43497--43782
30
9.8
29
72
13
167
33
5
24
36
1.78
43410--43776
59
6.3
58
74
10
248
35
6
23
34
1.80
43609--43795
29
6.4
29
77
6
173
35
2
26
35
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43609--43817
30
7.1
29
75
9
147
34
3
25
35
1.73
49347--49375
14
2.1
14
93
6
51
55
0
10
34
1.34
49739--49785
6
8.2
6
81
9
53
42
0
2
55
1.12
49705--49816
52
2.2
52
83
3
136
42
0
3
52
1.24
49707--49816
35
3.2
34
80
7
107
42
0
3
52
1.25
49739--49785
23
2.0
23
84
8
60
42
0
2
55
1.12
49707--49816
17
6.4
17
78
7
105
42
0
3
52
1.25

Tables:   1

The End!