Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014401.1 Kokia drynarioides strain JFW-HI SEQ_129439, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25457

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
364--394
10
2.9
11
90
9
55
25
9
0
64
1.24
3436--3850
30
14.1
29
77
11
364
33
29
3
33
1.75
3440--3836
59
6.7
58
82
7
378
34
28
3
32
1.75
14657--14716
27
2.2
27
91
8
95
18
20
8
53
1.70
15165--15935
205
3.8
205
88
3
1065
33
21
23
21
1.97
16350--16408
17
3.6
16
84
6
73
40
1
0
57
1.09
16360--16422
6
11.0
6
72
16
53
46
3
0
50
1.17
17688--17715
13
2.2
13
100
0
56
14
0
32
53
1.41
18260--18497
29
8.1
29
84
6
284
33
31
4
31
1.77
18251--18515
59
4.5
59
84
3
329
32
31
4
31
1.78
18864--19055
96
2.0
96
82
4
235
30
19
12
37
1.89
23511--23573
28
2.2
28
82
2
72
22
9
33
34
1.86
23588--23737
58
2.6
58
77
7
160
34
8
29
28
1.87
23612--23747
59
2.3
58
83
6
159
31
8
31
28
1.86
23705--23915
29
7.2
29
80
5
217
34
2
29
33
1.71
23733--23903
30
5.8
30
79
6
161
34
1
28
35
1.65
23701--23940
59
4.1
59
85
3
297
33
3
29
33
1.74
24950--25000
22
2.4
22
87
9
70
43
1
0
54
1.11

Tables:   1

The End!