Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014413.1 Kokia drynarioides strain JFW-HI SEQ_129451, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  119465

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4232--4281
21
2.3
23
80
13
61
46
4
2
48
1.32
13971--14039
31
2.2
31
100
0
138
30
14
7
47
1.71
13971--14039
16
4.4
16
71
18
56
30
14
7
47
1.71
13992--14041
15
3.3
15
70
25
50
32
12
6
50
1.64
16614--16645
16
2.0
16
93
0
55
62
9
6
21
1.47
21939--21963
11
2.3
11
100
0
50
0
16
0
84
0.63
21968--22001
18
1.9
18
88
5
52
52
5
5
35
1.50
24811--24870
18
3.4
18
82
13
63
26
0
11
61
1.30
26474--26524
22
2.2
22
82
6
57
72
0
3
23
1.01
26486--26538
22
2.4
23
87
6
74
64
0
3
32
1.12
35627--35652
3
8.7
3
100
0
52
0
30
0
69
0.89
50094--50165
29
2.3
32
81
11
96
33
1
9
55
1.41
53483--53532
22
2.3
20
78
18
55
44
0
10
46
1.37
53691--53722
17
1.9
17
93
6
57
15
21
0
62
1.32
55950--55997
24
2.0
25
87
4
71
43
2
2
52
1.24
55874--56100
120
1.9
115
79
4
247
45
3
8
42
1.51
56256--56289
15
2.2
16
89
5
52
35
5
0
58
1.22
84521--84586
4
16.2
4
81
9
71
66
0
33
0
0.92
84521--84585
25
2.6
25
78
2
78
67
0
32
0
0.91
84626--84671
20
2.4
19
82
7
56
34
2
2
60
1.21
89560--89609
16
3.2
16
73
21
61
36
0
4
60
1.16
90191--90236
9
5.0
9
78
5
56
2
43
0
54
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
90231--90263
17
1.9
17
93
0
57
3
21
0
75
0.93
93718--93746
2
14.5
2
100
0
58
48
0
0
51
1.00
94496--94553
27
2.1
29
84
9
77
39
6
5
48
1.52
96243--96539
114
2.6
113
78
7
296
41
14
12
31
1.83
96469--96652
56
3.3
56
83
3
226
50
14
11
23
1.76
98962--99070
54
2.0
54
98
0
209
21
18
33
27
1.96
107037--107111
38
2.0
38
94
0
132
30
10
25
33
1.90
113682--113708
2
13.5
2
100
0
54
48
0
0
51
1.00
114131--114285
81
1.9
82
88
4
233
50
9
2
37
1.48
114246--114291
23
2.0
23
86
0
65
52
4
4
39
1.41
114275--114342
30
2.3
31
84
5
86
54
2
1
41
1.24
114127--114355
83
2.8
79
82
5
242
52
6
2
38
1.41

Tables:   1

The End!