Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014414.1 Kokia drynarioides strain JFW-HI SEQ_129452, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  101275

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1669--1710
22
1.9
23
85
9
61
35
26
16
21
1.94
2625--2687
17
3.8
16
81
10
63
50
4
0
44
1.23
2898--2943
21
2.1
21
84
11
58
21
10
10
56
1.64
6048--6090
19
2.3
19
79
0
50
32
0
4
62
1.15
11893--11959
33
2.0
33
100
0
134
43
11
14
29
1.82
14899--14977
26
3.2
26
67
10
83
26
6
8
58
1.52
14892--14991
49
2.0
49
100
0
200
24
6
10
60
1.51
20333--20375
19
2.3
19
83
0
59
34
2
0
62
1.08
30477--30511
18
2.0
18
88
5
54
48
5
0
45
1.26
37536--37585
25
2.0
25
100
0
100
32
20
24
24
1.98
47039--47084
25
1.9
25
86
8
69
32
4
6
56
1.45
47091--47400
157
2.0
156
87
3
453
37
17
16
27
1.92
49269--49314
24
1.9
23
86
8
65
56
6
4
32
1.45
50360--50422
26
2.4
25
80
15
65
7
11
1
79
1.00
53636--53672
17
2.2
17
95
0
65
56
2
8
32
1.43
55373--55418
24
1.9
23
86
8
65
56
6
4
32
1.45
56111--56156
25
1.9
25
86
8
69
32
2
6
58
1.36
56733--56783
25
2.0
25
100
0
102
39
0
23
37
1.55
57247--57321
6
12.8
6
78
5
57
20
4
1
74
1.05
57249--57323
5
14.2
5
81
12
55
20
4
1
74
1.05
57248--57289
19
2.2
19
86
0
57
16
2
2
78
0.96
58913--58953
22
2.0
20
90
9
64
78
2
4
14
1.03
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58961--59014
12
4.7
11
82
17
65
20
5
1
72
1.14
58961--59015
5
9.8
5
83
14
56
21
5
1
70
1.16
60377--62221
933
2.0
933
92
0
3100
37
16
13
32
1.88
64163--64202
21
1.9
21
90
10
64
77
0
2
20
0.88
64174--64203
16
1.9
15
93
6
51
76
0
3
20
0.92
64210--64243
18
1.9
18
94
5
61
17
0
5
76
0.98
65955--66035
24
3.4
24
87
0
126
24
12
8
54
1.65
88580--88629
20
2.5
19
80
6
55
50
0
4
46
1.20
88595--88635
20
2.1
20
86
4
57
46
2
2
48
1.28
88858--88927
30
2.3
30
85
4
88
27
2
20
50
1.62

Tables:   1

The End!