Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014426.1 Kokia drynarioides strain JFW-HI SEQ_129464, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  119688

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
374--399
3
8.7
3
100
0
52
30
0
69
0
0.89
1355--1417
21
3.0
21
83
0
90
23
39
7
28
1.83
16180--16212
15
2.1
17
88
11
52
48
12
9
30
1.71
16967--17057
21
4.3
21
70
21
66
58
3
1
37
1.22
17697--17757
16
3.5
17
70
14
52
39
4
1
54
1.32
17691--17754
19
3.4
20
68
14
55
40
4
1
53
1.31
19365--19403
20
2.0
20
89
0
60
46
2
5
46
1.38
31333--31376
20
2.2
20
84
8
54
63
2
2
31
1.19
33450--33567
54
2.2
53
90
1
182
36
19
12
31
1.89
37564--37598
3
12.0
3
93
6
63
68
0
31
0
0.90
41791--41815
4
6.2
4
100
0
50
52
24
0
24
1.48
57565--57599
16
2.2
16
89
0
52
0
14
0
85
0.59
59455--59490
13
2.8
13
91
0
54
33
2
0
63
1.08
60220--60263
21
2.1
21
82
0
52
20
61
9
9
1.53
60202--60272
36
2.0
36
85
0
97
23
56
5
14
1.59
72175--72428
127
2.0
128
96
0
465
40
15
11
33
1.82
77998--78173
23
7.5
22
80
9
131
13
25
21
40
1.88
78062--78119
22
2.6
23
83
2
73
12
22
27
37
1.89
78101--78173
26
2.8
26
95
2
128
12
27
20
39
1.88
81027--81523
245
2.0
247
92
3
820
29
15
16
38
1.89
88627--88679
4
13.0
4
78
11
54
28
5
22
43
1.76
92746--92885
47
3.0
46
87
3
208
30
11
14
43
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
92963--93001
16
2.4
16
83
8
53
53
0
2
43
1.14
96317--96616
145
2.1
145
99
0
591
41
4
9
45
1.55
103963--104007
13
3.6
13
82
11
58
75
4
0
20
0.97
109454--109497
16
2.6
17
85
3
63
20
0
2
77
0.88
109840--109882
21
2.0
21
86
0
59
20
6
11
60
1.54

Tables:   1

The End!