Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014432.1 Kokia drynarioides strain JFW-HI SEQ_129470, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  130003

Tables:   1   

This is table  1  of  1  ( 66 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1636--1757
65
1.9
65
87
0
181
52
13
18
15
1.74
4064--4292
9
24.5
10
65
20
79
64
2
3
29
1.22
4162--4232
28
2.5
29
81
6
92
64
1
1
32
1.11
4121--4204
44
1.9
43
83
7
107
65
2
3
28
1.22
4127--4213
35
2.5
34
78
10
95
67
2
3
26
1.18
4162--4248
28
3.1
28
78
8
86
62
2
3
32
1.25
4182--4270
28
3.1
27
76
12
88
66
2
3
28
1.20
4162--4270
57
1.9
56
85
12
150
64
2
3
29
1.25
4182--4293
19
5.8
20
68
20
71
65
2
2
29
1.20
4571--4611
19
2.2
18
87
12
57
43
2
0
53
1.13
15877--15922
25
1.9
23
86
8
65
36
4
4
54
1.40
18301--18435
68
2.0
69
86
4
193
50
5
2
41
1.40
18378--18453
37
2.1
36
83
11
93
53
2
2
40
1.28
20506--20587
17
4.8
17
80
0
92
43
3
3
48
1.38
22328--22869
29
18.4
29
76
9
456
36
27
2
33
1.69
22328--22847
59
8.8
59
85
1
666
36
27
1
34
1.68
35363--35456
17
5.8
17
73
14
56
44
4
3
47
1.38
35363--35463
6
17.3
6
68
17
61
45
3
2
47
1.36
35380--35436
29
2.0
29
82
6
71
45
5
5
43
1.49
35378--35471
23
4.0
23
73
12
75
44
3
3
48
1.34
37288--37862
29
20.0
28
72
11
326
33
27
3
34
1.75
37288--37861
59
10.0
59
79
6
570
33
27
3
35
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37558--37654
48
2.0
48
84
7
126
34
22
3
40
1.70
37499--37713
107
2.0
107
86
1
297
33
26
4
35
1.77
37465--37773
166
1.9
166
85
1
431
34
27
3
34
1.73
37606--37883
30
9.4
30
78
4
233
35
27
3
33
1.74
40305--40348
23
2.0
23
86
13
65
29
0
6
63
1.20
43359--43405
24
2.0
24
87
4
69
46
4
8
40
1.54
43623--43658
18
1.9
19
88
5
56
52
13
5
27
1.63
44749--44775
9
3.0
9
100
0
54
11
11
33
44
1.75
45049--45088
20
2.0
20
95
0
71
55
0
2
42
1.13
60027--60065
19
2.1
19
85
0
51
33
20
25
20
1.97
60075--60255
36
5.0
36
83
6
197
32
12
27
27
1.92
60082--60267
72
2.6
73
83
4
218
33
11
26
28
1.91
64575--64626
22
2.3
24
78
18
58
44
5
7
42
1.57
67231--67280
18
2.7
19
78
12
59
72
6
2
20
1.16
67385--67719
30
11.2
30
73
9
103
33
5
21
39
1.78
67395--67719
89
3.6
88
75
7
271
33
5
21
39
1.77
67472--67720
60
4.1
58
78
10
232
34
5
21
38
1.76
67421--67720
120
2.5
120
79
8
315
33
5
21
39
1.76
67384--67720
59
5.6
59
75
9
263
33
5
21
39
1.77
68885--68916
8
3.8
9
84
16
50
21
0
0
78
0.76
69645--69774
39
3.2
41
80
6
158
21
20
27
30
1.98
69625--69774
39
3.7
39
76
7
131
22
20
27
30
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72842--72880
19
2.1
19
85
9
53
76
0
2
20
0.90
74937--75139
30
6.8
30
76
7
130
35
5
19
39
1.75
74975--75148
59
2.9
58
73
8
154
38
5
17
39
1.72
76108--76155
22
2.2
21
85
3
60
2
16
8
72
1.18
79145--79186
22
1.9
22
85
9
59
16
7
4
71
1.26
89230--89267
3
12.7
3
83
10
51
68
0
28
2
1.03
89223--89264
12
3.5
11
84
15
57
66
0
30
2
1.04
97385--97429
12
3.3
14
84
12
58
66
0
31
2
1.04
99310--99367
29
2.0
29
100
0
116
20
20
6
51
1.70
104254--104372
19
6.3
19
75
3
105
28
22
15
33
1.94
104254--104372
38
3.1
37
77
9
123
28
22
15
33
1.94
107195--107226
15
2.1
15
94
0
55
31
25
15
28
1.96
115662--115700
20
2.0
20
90
10
62
20
2
0
76
0.90
115650--115701
20
2.7
19
80
16
54
23
1
0
75
0.91
115657--115757
37
2.8
36
80
10
109
26
2
0
69
1.09
115663--115712
8
7.0
7
80
15
50
26
2
0
72
0.96
115683--115712
15
2.0
15
93
0
51
30
0
0
70
0.88
116205--116234
11
2.7
11
94
0
51
50
0
6
43
1.28
117533--117907
188
2.0
188
96
0
696
32
13
17
36
1.89
124681--124717
20
1.9
20
94
5
67
81
0
16
2
0.81
124715--124755
22
1.9
21
85
5
55
51
4
0
43
1.23
128247--128368
65
1.9
65
85
0
172
16
18
13
52
1.75

Tables:   1

The End!