Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014434.1 Kokia drynarioides strain JFW-HI SEQ_129472, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59171

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1555--1583
7
4.3
7
91
8
51
0
51
0
48
1.00
1558--1583
13
2.0
13
100
0
52
0
53
0
46
1.00
2206--2287
41
2.0
41
97
0
155
37
9
25
26
1.87
3414--3461
24
1.9
26
84
16
66
45
0
22
31
1.53
3524--3600
23
3.3
23
91
7
113
11
25
22
40
1.88
3536--3667
23
5.9
22
81
9
108
13
24
23
38
1.91
8544--8608
24
2.7
24
68
13
62
30
6
18
44
1.74
25673--25722
24
2.1
23
81
3
55
42
0
52
6
1.26
27333--27392
31
2.0
30
87
6
86
36
1
8
53
1.41
27580--27637
29
2.0
29
89
3
89
53
13
3
29
1.56
29538--29584
22
2.3
19
85
10
58
57
2
0
40
1.11
34561--34640
40
2.0
39
95
2
142
48
8
15
27
1.74
41664--41704
22
1.9
21
85
5
55
56
2
9
31
1.45
53126--53173
23
2.0
24
84
4
62
31
4
4
60
1.35
55680--55733
23
2.3
23
93
0
90
9
33
20
37
1.84
55724--55871
23
6.4
23
81
9
133
12
23
20
42
1.87
55729--55871
46
3.1
45
79
6
155
13
23
20
43
1.86
55737--55873
69
2.0
66
83
13
170
13
21
20
44
1.85
58171--58891
365
2.0
364
98
0
1379
31
12
23
32
1.92

Tables:   1

The End!