Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014438.1 Kokia drynarioides strain JFW-HI SEQ_129476, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  148607

Tables:   1   

This is table  1  of  1  ( 61 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
675--722
14
3.2
16
85
8
57
0
37
0
62
0.95
697--739
7
6.1
7
86
10
61
0
25
0
74
0.82
6026--6054
2
14.5
2
100
0
58
48
0
0
51
1.00
9317--9366
26
1.9
26
83
0
64
46
8
4
42
1.52
10773--10809
15
2.5
15
87
12
51
32
2
2
62
1.23
14655--14682
2
14.0
2
100
0
56
50
0
0
50
1.00
17572--17618
23
2.0
23
83
0
58
23
14
17
44
1.85
30905--30934
2
15.0
2
100
0
60
50
50
0
0
1.00
35884--35928
23
2.0
23
86
0
63
68
15
4
11
1.34
38968--39010
19
2.3
19
84
8
52
53
0
4
41
1.21
45749--45776
8
3.5
8
100
0
56
64
10
0
25
1.26
59610--59669
31
2.1
28
81
12
68
53
6
1
38
1.37
65425--65473
21
2.2
22
78
7
55
46
20
2
30
1.62
79031--79063
15
2.1
16
88
5
50
33
0
0
66
0.92
80891--80945
23
2.4
22
76
8
56
56
0
3
40
1.17
80910--80981
31
2.3
31
86
9
94
54
1
1
43
1.17
96876--96900
7
3.6
7
100
0
50
60
0
0
40
0.97
99786--99810
2
12.5
2
100
0
50
52
0
0
48
1.00
100677--100706
15
1.9
16
93
6
53
46
3
0
50
1.18
112481--112532
15
3.4
16
76
7
54
53
0
28
17
1.44
114828--114879
15
3.4
16
76
7
54
53
0
28
17
1.44
115813--116073
30
8.7
30
75
10
185
33
1
27
36
1.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
115841--116077
30
8.0
29
76
6
206
32
1
29
36
1.68
115838--116077
60
4.0
59
78
6
234
32
1
29
36
1.68
115870--116073
90
2.3
91
80
7
245
34
1
26
37
1.66
116604--116655
15
3.4
16
76
7
54
53
0
28
17
1.44
117589--117849
30
8.7
30
75
10
185
33
1
27
36
1.68
117617--117853
30
8.0
29
76
6
206
32
1
29
36
1.68
117614--117853
60
4.0
59
78
6
234
32
1
29
36
1.68
117646--117849
90
2.3
91
80
7
245
34
1
26
37
1.66
118798--118825
3
9.3
3
100
0
56
32
0
0
67
0.91
119457--119522
6
11.5
6
71
20
52
50
1
1
46
1.20
119459--119522
17
3.8
17
87
0
92
51
1
1
45
1.20
119847--120237
205
1.9
205
88
1
586
20
21
21
37
1.95
120824--120851
3
9.3
3
100
0
56
32
0
0
67
0.91
121483--121548
6
11.5
6
71
20
52
50
1
1
46
1.20
121485--121548
17
3.8
17
87
0
92
51
1
1
45
1.20
121873--122263
205
1.9
205
88
1
586
20
21
21
37
1.95
122102--122431
168
2.0
168
88
1
500
20
21
20
37
1.95
121892--122634
373
2.0
373
90
1
1184
20
21
21
36
1.95
122246--122845
205
2.9
203
86
1
831
22
22
19
35
1.96
122656--123008
168
2.1
167
89
0
535
20
23
19
35
1.95
122451--123211
372
2.0
373
86
1
1060
21
22
19
36
1.95
121873--123365
577
2.6
577
91
1
2357
21
21
20
36
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
122818--123383
205
2.8
206
85
3
773
21
22
20
36
1.96
131198--131313
57
2.0
58
96
1
216
43
13
16
25
1.85
132494--132574
17
4.6
17
79
3
72
40
2
1
55
1.21
132488--132574
6
15.2
6
74
9
83
41
2
1
55
1.20
132514--132571
23
2.5
23
91
0
98
43
1
1
53
1.21
132488--132574
29
3.0
29
81
5
88
41
2
1
55
1.20
132528--132589
29
2.1
29
85
5
81
45
3
4
46
1.40
134367--134613
29
8.4
29
73
12
175
36
28
3
31
1.75
134366--134584
60
3.7
59
76
7
149
36
28
3
30
1.74
134517--134612
28
3.4
27
74
8
75
36
30
3
30
1.73
134457--134621
57
2.9
57
81
8
183
35
29
4
30
1.77
145559--145613
27
2.0
28
89
6
87
18
12
7
61
1.53
146100--146975
206
4.3
206
85
1
1094
37
22
20
19
1.94
147302--147377
6
13.2
6
78
8
86
43
2
1
52
1.23
147330--147373
23
1.9
23
100
0
88
40
2
2
54
1.25
147324--147392
29
2.4
29
87
4
86
44
2
4
47
1.37
148054--148135
3
27.0
3
79
7
85
59
2
1
36
1.18

Tables:   1

The End!