Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014439.1 Kokia drynarioides strain JFW-HI SEQ_129477, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  92494

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8559--8603
6
7.5
6
89
0
63
46
0
31
22
1.52
11085--11139
18
3.1
18
92
5
85
38
5
30
25
1.79
11136--11188
27
2.0
27
84
0
70
49
15
15
20
1.80
11331--11372
18
2.3
18
80
11
50
42
4
0
52
1.22
11338--11375
19
2.1
18
90
5
58
39
2
0
57
1.12
11408--11453
21
2.2
20
84
3
56
28
0
4
67
1.10
11496--11535
18
2.3
17
86
4
53
32
0
2
65
1.06
16483--16539
23
2.4
24
80
13
64
35
3
1
59
1.25
17605--17632
3
9.3
3
100
0
56
67
0
0
32
0.91
19124--19180
29
2.0
29
86
13
82
21
12
8
57
1.61
19103--19221
32
3.9
31
75
13
84
23
15
10
51
1.73
19445--19631
58
3.2
58
79
5
178
47
13
13
25
1.80
21039--21081
22
2.0
22
86
9
61
55
20
0
23
1.43
26804--26841
19
2.1
19
85
5
51
63
0
15
21
1.31
26839--26866
2
14.0
2
100
0
56
50
0
0
50
1.00
34084--34177
21
4.5
21
91
0
152
36
26
5
31
1.79
34866--35042
25
6.7
25
77
10
156
35
25
16
22
1.95
34866--35047
55
3.4
55
79
4
203
35
25
15
23
1.95
39404--39465
17
3.6
18
80
6
65
53
12
12
20
1.72
45678--45864
52
3.6
52
78
7
184
32
22
17
27
1.97
45678--45864
25
7.2
25
74
6
149
32
22
17
27
1.97
49700--49741
22
1.9
22
90
0
66
54
16
0
28
1.42
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65990--66015
2
13.0
2
100
0
52
50
0
0
50
1.00
67440--67760
158
2.0
158
85
1
428
22
23
23
29
1.99
79886--79982
42
2.3
42
85
3
124
29
12
17
40
1.86
80065--80113
24
2.0
24
88
0
71
22
20
24
32
1.98
80054--80212
63
2.5
63
86
1
237
23
19
22
33
1.97
80128--80175
24
2.0
24
83
0
60
25
14
27
33
1.94
80152--80282
39
3.4
39
83
0
181
25
21
21
32
1.98
82921--83083
69
2.4
68
82
5
184
30
17
19
31
1.95
83072--83488
157
2.7
156
80
6
420
26
21
18
33
1.96
83363--83538
67
2.6
67
81
1
192
26
21
18
33
1.96
91559--91598
16
2.6
16
92
4
64
65
0
0
35
0.93
92091--92160
4
17.8
4
78
11
65
71
0
27
1
0.94
92088--92158
33
2.1
35
86
5
101
70
0
28
1
0.96
92088--92172
33
2.6
32
80
12
93
71
0
27
1
0.93
92087--92171
18
4.6
19
73
21
74
70
0
28
1
0.95

Tables:   1

The End!