Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014456.1 Kokia drynarioides strain JFW-HI SEQ_129495, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19634

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1415--1454
21
1.9
21
84
0
53
45
10
5
40
1.60
3438--3476
3
13.0
3
100
0
78
33
0
0
66
0.92
4230--4258
14
2.0
15
93
6
51
20
6
20
51
1.70
4284--4344
6
10.7
6
77
10
65
55
3
0
40
1.16
4286--4343
11
5.2
11
81
4
53
55
3
0
41
1.17
4269--4344
17
4.4
17
83
3
98
53
2
1
42
1.23
4280--4345
11
6.4
11
70
19
52
59
3
0
37
1.13
4652--5457
206
3.9
205
85
2
1055
21
23
19
35
1.96
5441--5501
30
2.0
30
96
0
113
19
19
19
40
1.91
11875--11915
22
1.9
21
85
5
55
19
29
7
43
1.78
12233--12290
3
18.7
3
82
7
62
39
0
1
58
1.08
12223--12283
28
2.2
28
88
8
97
42
0
3
54
1.17
12238--12290
22
2.4
22
87
0
79
41
0
1
56
1.10
13065--13103
11
3.5
11
86
6
51
58
2
2
35
1.25
13045--13125
17
4.4
17
72
18
72
55
2
2
39
1.26
16803--16831
15
2.0
15
93
6
51
20
6
17
55
1.65
16862--16900
11
3.5
11
86
6
51
58
2
2
35
1.25
16842--16922
17
4.4
17
72
18
72
55
2
2
39
1.26

Tables:   1

The End!