Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001446.1 Kokia drynarioides strain JFW-HI SEQ_112960, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  109359

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4523--4825
43
7.1
43
83
1
322
24
16
26
32
1.96
4534--4825
85
3.4
84
83
2
332
24
17
26
31
1.97
4532--4825
128
2.3
128
82
2
340
25
17
25
31
1.97
5524--5591
29
2.4
28
85
9
84
54
5
0
39
1.25
5539--5583
14
3.1
14
75
6
54
53
4
0
42
1.21
7617--8199
291
2.0
291
97
0
1103
35
10
21
32
1.87
13828--13857
7
4.1
7
95
4
51
53
0
0
46
1.00
22735--22764
6
5.0
6
100
0
60
0
16
0
83
0.65
24777--24822
10
4.5
10
78
5
56
58
0
0
41
0.98
24778--24821
21
2.1
21
86
0
61
56
0
0
43
0.99
30726--30777
12
4.5
12
83
9
63
36
0
13
50
1.42
35909--35935
3
9.0
3
100
0
54
33
0
33
33
1.58
37948--37995
16
2.9
17
81
9
55
52
4
0
43
1.20
39887--39923
3
12.3
3
100
0
74
35
0
0
64
0.94
43396--43422
13
2.1
13
100
0
54
70
0
0
29
0.88
50005--50033
2
14.5
2
100
0
58
51
0
0
48
1.00
52589--52653
30
2.1
30
82
2
76
9
21
15
53
1.69
52800--52848
22
2.4
19
78
15
53
51
0
2
46
1.12
52806--52848
21
2.0
22
90
4
70
48
0
0
51
1.00
53546--53590
13
3.5
13
84
6
65
55
0
44
0
0.99
53546--53590
6
7.2
6
87
7
63
55
0
44
0
0.99
53645--53704
16
3.4
16
74
24
57
36
0
1
61
1.06
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
53651--53728
29
2.7
29
81
16
90
43
0
1
55
1.08
53691--53730
21
2.0
21
90
5
64
47
0
0
52
1.00
53646--53728
38
2.2
37
82
8
105
42
0
1
56
1.07
53651--53731
20
4.2
19
69
20
60
44
0
1
54
1.08
54082--54109
7
4.0
7
100
0
56
14
14
14
57
1.66
54165--54195
7
4.4
7
100
0
62
54
0
12
32
1.38
56441--56486
18
2.6
18
85
0
56
32
4
4
58
1.37
62229--62274
14
3.3
14
87
0
65
30
21
0
47
1.51
62229--62266
7
5.4
7
90
0
58
31
18
0
50
1.47
62430--62477
24
2.0
25
83
4
62
33
2
6
58
1.35
66012--66037
5
5.2
5
100
0
52
0
38
0
61
0.96
73781--73807
5
5.4
5
100
0
54
18
0
0
81
0.69
74796--74860
24
2.8
24
80
2
69
56
1
4
36
1.29
77392--77424
16
1.9
18
88
11
52
51
15
0
33
1.43
82253--82304
23
2.3
24
77
12
65
50
1
5
42
1.37
86912--86947
12
3.0
12
87
0
54
5
30
11
52
1.59
101190--101231
12
3.6
12
77
6
50
23
14
21
40
1.90
101173--101254
23
3.5
23
85
5
103
30
12
18
39
1.87
101220--101265
23
2.0
23
83
8
58
39
10
17
32
1.84

Tables:   1

The End!