Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014469.1 Kokia drynarioides strain JFW-HI SEQ_129508, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  110382

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8347--8379
2
16.5
2
100
0
66
51
0
0
48
1.00
8403--8449
18
2.6
17
83
12
60
51
0
8
40
1.33
8403--8449
17
2.6
17
80
12
51
51
0
8
40
1.33
9118--9162
3
15.0
3
95
0
81
66
2
0
31
1.04
9543--9582
15
2.5
17
84
8
57
62
0
2
35
1.09
12527--12579
21
2.6
19
83
16
70
28
13
26
32
1.93
12959--13002
19
2.4
17
85
11
52
45
0
6
47
1.29
23075--23165
45
2.0
45
95
0
164
43
21
15
18
1.87
35896--35995
33
3.1
31
76
15
87
50
1
1
48
1.14
42403--42454
24
2.2
23
86
13
70
46
5
7
40
1.57
45510--45666
78
2.0
78
100
0
314
52
2
25
19
1.58
45681--45773
31
3.0
31
96
0
168
34
8
22
34
1.85
49661--49778
59
2.0
59
100
0
236
22
16
16
44
1.87
50488--50534
23
2.0
23
87
0
67
44
4
10
40
1.59
52831--52909
23
3.5
22
84
3
95
37
26
22
12
1.90
55078--55126
22
2.2
22
85
7
64
44
2
2
51
1.24
55820--55934
3
37.3
3
72
8
70
53
4
3
39
1.38
56996--57138
29
4.9
29
70
14
98
32
29
6
31
1.84
56996--57241
59
4.2
59
72
11
184
30
27
6
35
1.81
63111--63154
21
2.1
21
100
0
88
36
20
13
29
1.91
63682--63722
17
2.4
17
91
0
64
31
7
17
43
1.76
64895--64943
22
2.2
22
85
7
64
44
2
2
51
1.24
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65637--65751
3
37.3
3
72
8
70
53
4
3
39
1.38
66813--66955
29
4.9
29
70
14
98
32
29
6
31
1.84
66813--67058
59
4.2
59
72
11
184
30
27
6
35
1.81
72928--72971
21
2.1
21
100
0
88
36
20
13
29
1.91
73499--73539
17
2.4
17
91
0
64
31
7
17
43
1.76
80345--80472
23
5.4
24
79
10
122
17
22
19
40
1.91
81319--81426
44
2.5
44
98
0
207
33
3
24
38
1.73
86947--87008
28
2.3
26
86
10
81
33
1
6
58
1.34
96453--96566
56
2.0
56
83
3
140
38
14
15
31
1.87
101669--101693
13
1.9
13
100
0
50
24
12
0
64
1.27
102583--102620
18
2.1
18
85
9
51
31
2
2
63
1.22
103690--103745
23
2.5
23
88
2
87
44
26
12
16
1.83

Tables:   1

The End!