Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014472.1 Kokia drynarioides strain JFW-HI SEQ_129511, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33382

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--45
16
3.0
16
78
12
51
60
6
0
33
1.23
1305--1389
43
2.0
43
83
4
109
30
10
10
48
1.72
1957--2093
45
3.0
45
84
0
175
32
26
21
20
1.98
2088--2130
21
2.0
21
90
0
68
20
37
16
25
1.93
2358--2403
14
3.3
14
82
11
58
54
21
0
23
1.45
5529--5593
15
4.6
15
77
12
75
1
32
0
66
1.01
5557--5595
4
9.2
4
83
10
51
0
28
0
71
0.86
5546--5593
13
3.5
13
88
5
60
0
33
0
66
0.92
6007--6039
16
2.0
17
88
5
50
39
3
12
45
1.57
18295--18338
21
2.1
21
91
8
72
36
6
4
52
1.49
22177--22205
6
4.8
6
100
0
58
86
0
13
0
0.58
23254--23291
20
1.9
20
89
10
60
60
2
10
26
1.43
29663--29729
32
2.2
30
82
10
75
53
8
16
20
1.69
33152--33199
11
4.3
11
78
5
51
37
0
4
58
1.18
33118--33226
6
19.0
6
71
14
70
43
0
2
54
1.15
33146--33226
23
3.5
23
78
8
76
44
0
2
53
1.14
33163--33226
29
2.2
29
77
5
76
46
0
1
51
1.10
33118--33226
17
6.4
17
81
5
130
43
0
2
54
1.15

Tables:   1

The End!