Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014478.1 Kokia drynarioides strain JFW-HI SEQ_129517, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45297

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
586--619
14
2.5
14
90
4
52
26
14
17
41
1.88
4834--4900
29
2.3
28
82
10
73
62
5
2
28
1.33
5941--5993
12
4.9
11
78
21
51
56
0
1
41
1.10
6161--6188
14
2.0
14
100
0
56
21
42
21
14
1.88
12992--13029
19
2.0
19
100
0
76
36
5
31
26
1.79
16110--16194
32
2.7
32
94
0
143
44
10
14
30
1.78
22832--22866
15
2.4
15
90
4
54
25
5
0
68
1.11
29442--29481
10
4.0
10
84
9
55
32
0
2
65
1.06
29443--29481
21
1.9
21
89
5
62
33
0
2
64
1.08
32127--32159
14
2.3
15
90
10
52
33
12
9
45
1.73
36940--36978
18
2.2
19
86
9
55
61
2
17
17
1.46
38680--38895
41
5.2
41
82
4
240
36
10
25
26
1.89
41242--41312
24
3.0
24
83
4
72
30
14
12
42
1.82
41253--41324
12
6.0
12
83
3
92
31
15
13
38
1.87
42595--42620
12
2.2
12
100
0
52
38
0
7
53
1.30
42931--43139
24
8.9
24
81
3
219
39
15
18
26
1.90
42975--43086
12
9.4
12
65
8
59
38
16
19
25
1.92
42932--43135
47
4.3
47
85
0
255
39
16
18
26
1.91

Tables:   1

The End!