Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014479.1 Kokia drynarioides strain JFW-HI SEQ_129518, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56064

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3026--3066
3
13.7
3
94
0
73
0
29
0
70
0.87
5259--5457
37
5.4
37
80
2
202
14
19
31
34
1.91
8032--8129
39
2.5
39
81
8
135
30
16
21
31
1.95
12975--13069
39
2.4
39
89
3
154
31
17
21
29
1.96
17302--17340
14
2.7
14
84
4
51
35
0
0
64
0.94
18566--18591
12
2.2
12
100
0
52
57
0
15
26
1.38
21269--21314
11
4.2
11
82
0
56
13
4
15
67
1.38
21271--21313
22
2.0
22
95
0
77
13
4
16
65
1.43
21902--21957
29
1.9
29
82
13
71
50
8
3
37
1.51
24661--24714
26
2.1
26
92
0
90
29
25
20
24
1.99
24704--24781
37
2.1
38
83
7
97
32
12
25
29
1.93
29263--29345
36
2.3
37
82
2
105
21
19
32
26
1.97
29421--29457
19
1.9
19
100
0
74
59
5
5
29
1.42
34151--34195
16
2.7
16
83
16
56
68
0
0
31
0.89
37678--37833
68
2.3
67
83
6
181
23
17
16
42
1.89
41087--41172
37
2.4
36
82
7
102
17
17
30
34
1.93
42177--42214
20
2.0
20
94
5
69
21
18
2
57
1.52
43780--43831
26
2.0
27
96
3
97
23
34
7
34
1.83
43817--43842
11
2.4
11
100
0
52
19
34
7
38
1.80
47219--47275
15
3.9
14
79
6
69
52
5
3
38
1.41
51320--51388
36
1.9
36
93
0
120
17
27
14
40
1.88
51667--51693
3
9.0
3
100
0
54
33
0
33
33
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54231--54281
26
1.9
26
84
4
66
50
5
5
37
1.51

Tables:   1

The End!