Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014480.1 Kokia drynarioides strain JFW-HI SEQ_129519, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41134

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5518--5552
15
2.2
16
95
5
63
74
0
14
11
1.08
5514--5580
26
2.7
24
77
11
71
74
1
10
13
1.14
6071--6127
21
2.7
21
88
0
87
22
24
21
31
1.98
6828--6919
41
2.2
41
100
0
184
20
20
13
45
1.84
13923--14151
41
5.5
41
82
5
228
23
26
10
40
1.86
15307--15384
42
1.9
40
92
5
129
41
7
3
47
1.50
17163--17291
60
2.1
61
88
5
199
38
25
1
34
1.66
17164--17272
30
3.6
30
89
0
182
39
26
0
33
1.63
17164--17379
89
2.4
90
78
8
226
35
24
3
36
1.73
29814--30290
39
12.4
39
70
4
205
23
29
19
27
1.98
29853--30347
78
6.4
77
81
4
489
24
29
19
27
1.98
29774--30208
117
3.8
116
77
9
406
22
28
19
28
1.98
29898--30325
229
1.9
229
85
0
595
24
30
18
26
1.98
30843--30921
6
13.5
6
70
19
60
45
5
1
48
1.32
32743--32966
30
7.5
30
72
14
133
36
21
4
37
1.73
32874--32940
29
2.3
29
78
14
75
31
22
5
40
1.78
36316--36444
23
5.6
21
74
15
78
11
22
20
44
1.84
36339--36466
23
5.4
25
76
11
99
12
21
20
45
1.84
36323--36443
46
2.6
47
73
11
122
12
21
20
45
1.84
36342--36491
69
2.1
68
83
11
180
13
21
18
46
1.83
39261--39315
22
2.6
21
74
5
56
16
3
12
67
1.36

Tables:   1

The End!