Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014487.1 Kokia drynarioides strain JFW-HI SEQ_129526, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39003

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1540--1574
9
3.7
10
85
14
56
77
5
8
8
1.13
2630--2676
25
2.0
25
87
8
71
36
4
6
53
1.46
9039--9188
70
2.1
71
95
1
266
59
12
10
18
1.60
11330--11379
25
2.0
25
88
7
75
32
2
0
66
1.03
11331--11378
23
2.1
22
84
3
60
31
2
0
66
1.03
17093--17149
15
3.9
14
73
15
53
59
3
3
33
1.31
21072--21098
2
13.5
2
100
0
54
48
0
0
51
1.00
21714--21782
29
2.3
30
82
7
88
44
13
7
34
1.71
22057--22357
151
2.0
151
95
1
541
41
2
16
39
1.61
22513--22577
10
6.3
10
72
11
51
63
1
0
35
1.04
22638--22709
22
3.5
20
73
21
60
33
1
2
62
1.18
22615--22699
9
8.7
9
71
15
53
30
1
3
64
1.17
22659--22709
10
4.7
11
76
11
52
35
0
1
62
1.06
22621--22697
20
3.9
19
79
6
82
32
1
2
63
1.16
23208--23235
6
4.7
6
100
0
56
17
0
14
67
1.22
24722--24789
24
2.8
24
90
0
109
25
11
8
54
1.65
26693--26743
24
2.1
24
85
0
66
25
13
7
52
1.67
26701--26755
24
2.3
24
84
6
67
30
14
7
47
1.71
28179--28237
31
1.9
31
82
0
73
18
10
23
47
1.79
28189--28259
31
2.3
31
80
0
79
18
9
22
49
1.77
28443--28674
112
2.1
112
100
0
464
31
14
11
42
1.81
29507--29532
2
13.0
2
100
0
52
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34806--34838
16
2.1
16
100
0
66
48
18
15
18
1.81
37949--38172
124
1.8
124
83
3
299
34
22
12
30
1.90

Tables:   1

The End!