Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014517.1 Kokia drynarioides strain JFW-HI SEQ_129556, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  207502

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3540--3707
41
4.2
41
93
3
265
44
14
19
22
1.86
11293--11365
20
3.5
19
74
17
65
71
13
5
9
1.30
13126--13170
23
2.0
22
82
4
54
40
11
20
28
1.86
15453--15522
28
2.5
26
78
15
61
34
30
8
27
1.87
15465--15518
28
1.9
28
88
0
81
35
27
9
27
1.87
26873--26929
30
1.9
29
82
3
69
52
8
19
19
1.71
28257--28291
15
2.3
15
90
0
52
68
14
14
2
1.32
28779--28820
22
1.9
22
90
9
68
38
9
7
45
1.64
40711--40780
30
2.3
30
82
7
79
55
7
12
24
1.62
44277--44735
227
2.0
227
86
0
641
40
17
21
20
1.92
54121--54199
41
1.9
41
81
2
95
35
7
0
56
1.28
58447--58607
80
2.0
79
97
1
304
46
6
22
23
1.76
65441--65505
15
4.0
15
75
21
60
41
0
3
55
1.15
65521--65557
16
2.3
16
86
13
58
40
0
0
59
0.97
69038--69159
23
5.3
24
87
7
155
14
20
22
41
1.89
69050--69164
46
2.5
46
90
2
178
14
20
22
42
1.88
80435--80476
21
2.1
21
86
8
61
57
4
38
0
1.20
93324--93358
2
17.5
2
87
0
52
0
54
0
45
0.99
94393--94418
2
13.0
2
100
0
52
50
0
0
50
1.00
94552--94589
18
2.1
18
85
9
51
50
13
10
26
1.73
99152--99198
10
4.8
10
73
5
51
27
8
8
55
1.59
99145--99198
20
2.8
19
83
5
72
27
9
11
51
1.67
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
99839--99864
5
5.2
5
100
0
52
23
57
19
0
1.40
103248--103274
2
13.5
2
100
0
54
48
0
0
51
1.00
107148--107206
19
3.2
19
75
15
61
62
1
0
35
1.05
108966--108994
6
4.8
6
100
0
58
86
0
13
0
0.58
119200--119240
21
2.0
21
90
0
64
75
7
0
17
1.02
119183--119240
26
2.3
24
82
11
71
75
6
0
17
1.01
139426--139490
33
2.0
33
84
6
87
23
20
23
33
1.97
142152--142249
33
3.0
33
87
0
133
19
19
26
34
1.96
147120--147212
47
2.0
46
93
4
161
22
8
21
47
1.78
159424--159482
31
1.9
31
85
0
82
32
8
13
45
1.74
161908--161993
31
2.8
31
89
0
109
39
12
13
33
1.83
169711--169772
3
20.3
3
96
3
115
33
0
0
66
0.92
200629--200692
31
2.1
31
88
8
96
57
0
1
40
1.08
200626--200705
40
2.1
38
83
9
99
57
0
1
41
1.07
205671--205765
23
4.1
24
67
17
58
41
1
4
53
1.27
205658--205766
6
19.0
6
68
14
52
41
0
3
54
1.24
205681--205766
29
3.0
29
76
11
70
40
1
3
54
1.25
205658--205766
17
6.4
17
77
5
112
41
0
3
54
1.24
206485--206529
3
15.0
3
85
0
54
57
0
0
42
0.98

Tables:   1

The End!