Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014543.1 Kokia drynarioides strain JFW-HI SEQ_129582, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69949

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2923--3014
29
3.1
29
68
20
91
23
8
2
65
1.32
2915--3034
59
2.0
60
93
4
208
25
8
1
64
1.31
3008--3052
23
1.9
23
86
4
63
22
8
0
68
1.16
9650--9706
6
9.5
6
74
14
55
14
1
15
68
1.29
9660--9700
20
2.0
20
85
0
55
12
2
17
68
1.31
10501--10569
30
2.3
30
90
5
104
26
20
23
30
1.98
11414--11475
20
3.2
20
80
19
69
61
6
0
32
1.21
17466--17695
30
7.8
30
78
8
195
36
20
7
34
1.81
25856--26149
30
9.8
30
80
9
298
37
1
24
37
1.63
26039--26170
30
4.4
30
83
0
104
39
2
21
36
1.66
25856--26170
119
2.6
117
78
7
339
37
1
24
36
1.65
27454--27486
16
2.1
17
88
11
52
24
6
24
45
1.75
27884--27924
6
7.2
6
83
10
59
51
2
0
46
1.14
27882--27924
22
2.0
22
95
0
77
53
2
0
44
1.13
27890--27922
16
2.1
16
94
0
57
54
3
0
42
1.15
28277--28440
83
2.0
84
93
2
287
20
18
17
43
1.88
28686--29149
39
11.9
39
66
8
210
25
18
30
25
1.98
28682--29141
78
5.9
77
74
9
360
25
18
30
24
1.98
37138--37492
30
12.1
31
73
14
152
38
4
25
32
1.75
37150--37248
29
3.3
29
81
9
103
40
2
22
35
1.65
41714--42114
200
2.0
200
94
0
694
37
14
19
28
1.91
45151--45184
16
2.1
16
94
0
59
17
29
5
47
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54033--54216
49
3.8
49
76
5
167
32
15
26
26
1.95
54039--54215
98
1.8
98
84
7
243
30
15
27
26
1.96
54033--54287
49
5.2
49
75
5
158
32
13
24
29
1.93
55533--55570
20
1.9
20
94
0
67
31
15
5
47
1.68
56047--56090
20
2.2
20
84
4
54
63
9
11
15
1.51
56225--56257
2
17.0
2
93
6
59
48
0
0
51
1.00
68721--68773
23
2.3
23
90
0
79
60
3
7
28
1.41
68732--68779
23
2.1
23
88
0
69
56
4
8
31
1.48

Tables:   1

The End!