Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014548.1 Kokia drynarioides strain JFW-HI SEQ_129587, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28773

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1144--1186
20
2.2
20
83
4
52
41
0
2
55
1.12
2945--3035
31
2.9
31
73
12
87
35
7
7
49
1.60
14072--14373
59
5.2
59
91
4
486
29
4
32
33
1.77
14053--14349
29
10.1
29
81
13
342
29
4
32
32
1.78
14072--14383
29
10.6
28
77
16
260
29
4
32
33
1.77
15691--15767
17
4.6
16
79
9
82
51
5
1
41
1.32
15691--15767
34
2.3
34
83
0
100
51
5
1
41
1.32
16576--16607
2
16.0
2
100
0
64
50
0
0
50
1.00
17381--17422
21
2.1
21
82
8
52
30
2
19
47
1.62
22263--22404
23
6.4
23
71
17
95
11
24
19
43
1.85
22277--22351
39
1.9
39
83
0
96
13
22
20
44
1.86
23538--23587
19
2.5
20
81
18
59
54
6
0
40
1.25
24217--24340
10
13.0
9
71
16
81
32
0
6
60
1.28
24246--24308
19
3.3
19
82
6
65
30
0
7
61
1.24
24230--24339
9
11.2
10
70
16
54
32
0
6
60
1.28
24325--24385
20
3.3
19
77
11
63
44
0
1
54
1.10
24648--24712
17
3.9
17
77
15
57
38
0
0
61
0.96
24664--24719
15
3.6
15
75
17
60
32
0
1
66
1.03
24649--24719
23
2.9
24
81
12
83
35
0
1
63
1.03
24665--24711
8
6.1
8
78
7
53
31
0
0
68
0.90
25103--25157
29
1.9
29
85
3
76
60
10
7
21
1.55
25089--25216
29
4.3
29
69
14
75
53
9
9
27
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26565--26623
10
5.6
10
76
11
55
71
1
6
20
1.18
26565--26621
21
2.7
21
81
10
62
71
1
7
19
1.17
26827--26865
19
2.2
16
86
13
51
61
5
2
30
1.31

Tables:   1

The End!