Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014555.1 Kokia drynarioides strain JFW-HI SEQ_129594, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  156930

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1326--1359
17
1.9
18
88
5
52
8
11
0
79
0.94
4263--4404
71
2.0
71
98
0
275
30
14
17
38
1.89
11891--11924
16
2.2
15
94
5
59
23
11
8
55
1.63
19550--19583
16
2.2
15
89
5
50
67
5
0
26
1.13
19802--19833
15
2.1
15
100
0
64
43
18
18
18
1.88
35260--35300
19
2.1
20
90
4
66
21
0
21
56
1.43
37182--37217
13
3.0
13
80
19
51
27
5
0
66
1.13
37192--37235
18
2.5
18
85
3
54
22
4
4
68
1.27
37376--37445
35
2.0
35
100
0
140
31
11
22
34
1.90
38486--38524
17
2.3
17
95
0
60
15
20
12
51
1.76
45735--45796
24
2.5
24
80
15
72
29
0
20
50
1.49
47431--47480
18
2.8
18
78
0
55
52
10
2
36
1.47
47431--47478
12
4.0
12
75
0
51
52
10
2
35
1.48
48747--48808
27
2.3
27
97
0
115
41
6
9
41
1.63
51244--51277
17
2.0
18
88
11
54
47
0
11
41
1.40
54893--54942
22
2.2
22
82
10
57
48
2
12
38
1.52
61166--61215
20
2.5
19
84
9
64
40
12
8
40
1.72
66208--66300
40
2.3
40
87
1
125
23
20
22
33
1.97
66229--66531
42
7.5
40
83
5
340
24
16
30
29
1.96
66229--66530
81
3.7
81
86
2
394
24
16
30
28
1.97
68577--68651
31
2.6
28
78
12
78
38
17
1
42
1.58
68599--68816
30
7.3
30
78
10
198
35
20
3
40
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
83110--83148
18
2.2
18
90
4
62
15
15
12
56
1.68
89261--89300
2
20.5
2
92
5
64
45
0
2
52
1.14
89644--89679
14
2.5
15
90
4
56
80
2
8
8
0.99
110466--111047
49
12.0
49
67
12
286
37
15
26
21
1.92
110439--110882
98
4.5
98
90
1
622
37
15
27
20
1.92
110758--111018
143
1.8
143
83
1
344
36
16
25
21
1.94
116608--116830
30
7.4
30
76
8
177
35
22
3
38
1.70
116634--116830
90
2.2
89
83
7
238
34
21
3
40
1.71
116645--116830
60
3.1
59
81
3
212
34
20
3
40
1.71
122484--122670
52
3.6
52
91
1
313
35
24
14
25
1.93
128716--128745
15
2.0
15
93
0
51
0
23
0
76
0.78
130027--130063
18
2.1
18
89
0
56
13
35
10
40
1.80
130058--130099
18
2.3
18
83
0
57
11
26
7
54
1.62
130855--130914
26
2.4
24
81
10
75
60
0
3
36
1.14
140758--140801
22
2.0
23
86
13
65
47
11
9
31
1.71

Tables:   1

The End!