Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014571.1 Kokia drynarioides strain JFW-HI SEQ_129610, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58196

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1530--1626
51
1.9
51
83
8
126
62
7
4
25
1.39
3099--3147
26
2.0
26
84
8
66
57
0
0
42
0.99
5436--5490
20
2.8
20
86
8
69
38
0
3
58
1.16
10436--10461
11
2.4
11
100
0
52
26
0
7
65
1.20
10453--10513
26
2.5
24
84
7
77
29
0
0
70
0.88
20874--21082
102
2.0
105
92
5
354
23
5
22
48
1.71
25979--26003
2
12.5
2
100
0
50
52
0
0
48
1.00
32825--32886
20
3.1
20
88
0
88
46
6
16
30
1.72
34411--34449
17
2.2
18
86
4
53
51
2
0
46
1.14
35501--35637
31
4.6
31
74
19
114
28
15
10
45
1.78
35501--35687
88
2.1
89
84
8
240
26
16
11
45
1.82
35776--35903
27
4.5
27
72
18
66
48
11
16
23
1.79
36623--36655
7
4.7
7
96
0
57
45
9
0
45
1.35
44406--44430
4
6.2
4
100
0
50
52
0
0
48
1.00
46522--46547
3
8.7
3
100
0
52
69
0
30
0
0.89
48825--48878
2
28.0
2
81
7
67
46
0
3
50
1.19
48815--48863
24
2.0
24
96
0
89
44
0
6
48
1.27
51365--51881
60
8.7
59
72
15
318
29
17
16
36
1.92
51393--51604
106
2.0
104
81
7
248
30
17
14
37
1.89
51730--51859
68
1.9
68
90
3
208
24
18
16
40
1.91
55607--55655
12
3.8
12
75
19
53
51
0
8
40
1.32
55738--55778
11
3.7
11
82
17
50
51
4
0
43
1.23
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55771--56479
84
8.5
87
89
5
627
42
5
4
47
1.45
55875--55986
38
3.0
38
62
25
94
40
4
5
50
1.45
55878--55986
35
3.0
35
68
21
107
40
4
5
49
1.46
55914--56479
84
6.8
84
94
0
956
42
5
4
47
1.45
55771--56479
168
4.3
168
91
3
1102
42
5
4
47
1.45
55771--56479
252
2.8
248
90
5
1103
42
5
4
47
1.45

Tables:   1

The End!