Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014582.1 Kokia drynarioides strain JFW-HI SEQ_129621, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  119517

Tables:   1   

This is table  1  of  1  ( 65 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
209--303
29
3.2
28
72
19
86
31
6
27
34
1.82
189--277
29
3.0
29
70
20
85
38
10
24
26
1.87
230--434
29
6.9
30
74
11
156
33
4
27
35
1.77
79--434
59
6.1
58
76
8
212
33
7
26
31
1.85
1434--1490
3
19.0
3
96
0
60
22
0
10
66
1.22
2200--2308
6
18.7
6
70
12
75
49
1
3
44
1.30
2236--2287
19
2.8
19
91
5
81
57
0
1
40
1.10
2202--2287
17
4.9
17
78
10
93
52
2
3
41
1.31
4252--4294
16
2.6
16
81
3
59
69
2
0
27
1.00
4273--4314
21
2.0
22
85
4
59
69
2
2
26
1.13
6457--6491
6
5.8
6
96
0
61
0
34
0
65
0.93
19737--19773
18
2.1
18
94
0
65
35
13
8
43
1.74
22533--22714
97
1.9
97
89
4
287
38
16
15
29
1.89
22736--22806
28
2.5
28
88
0
106
39
23
8
28
1.84
22764--22815
20
2.6
20
84
0
77
40
23
9
26
1.85
22728--22806
4
19.8
4
72
0
59
41
22
7
27
1.81
22879--22930
4
13.5
4
89
4
63
42
25
3
28
1.72
25011--25049
20
2.0
20
85
10
53
82
0
7
10
0.86
29413--29453
6
7.2
6
89
10
68
48
14
0
36
1.44
29413--29459
12
4.1
11
89
10
60
48
12
2
36
1.53
29413--29470
18
3.4
17
86
13
59
48
12
3
36
1.57
33524--33548
3
8.3
3
100
0
50
68
0
32
0
0.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47038--47075
18
2.1
18
100
0
76
23
13
15
47
1.81
53426--53469
20
2.2
20
84
8
54
45
13
4
36
1.64
57207--57348
71
2.0
71
97
0
266
35
9
10
45
1.71
57334--57375
12
3.7
12
75
12
52
42
2
7
47
1.43
58287--58380
29
3.3
29
87
1
127
35
22
0
42
1.54
58288--58396
29
3.8
29
79
9
89
37
22
0
40
1.54
58278--58483
30
7.0
30
74
14
153
36
19
1
42
1.61
60276--60652
30
13.0
29
68
15
147
35
5
24
35
1.79
60257--60778
59
9.0
59
79
6
388
34
4
24
35
1.77
60409--60778
30
12.6
29
74
8
257
33
3
24
37
1.74
61669--61711
3
14.0
3
80
4
50
34
0
2
62
1.08
61669--61716
12
3.9
12
86
2
60
35
2
2
60
1.20
62386--62525
17
8.5
17
77
11
85
55
4
0
40
1.19
62405--62497
6
16.0
6
82
6
84
58
3
0
38
1.15
62405--62498
17
5.4
18
82
7
106
58
3
0
38
1.14
69900--69980
40
2.0
40
100
0
162
34
12
32
20
1.90
73258--73826
49
11.6
48
71
11
372
37
17
24
19
1.93
73255--73854
98
6.1
98
87
1
835
38
17
24
19
1.93
75589--75727
30
4.8
28
79
10
111
35
17
3
42
1.67
75515--75727
29
7.4
28
72
15
112
35
19
2
41
1.66
78991--79385
59
6.7
59
76
7
291
36
4
24
34
1.74
78991--79385
118
3.3
115
77
9
375
36
4
24
34
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79116--79386
30
9.2
30
72
18
176
36
2
24
35
1.71
80331--80384
9
5.8
9
80
10
56
40
0
1
57
1.09
81163--81206
17
2.6
17
85
0
61
54
4
0
40
1.21
82157--82525
49
7.4
48
71
11
242
18
23
18
39
1.92
82166--82525
98
3.6
98
82
5
459
18
23
18
39
1.92
83003--83038
18
2.0
18
94
0
63
58
5
11
25
1.54
94293--94365
29
2.5
28
80
14
78
36
5
21
35
1.77
94350--94454
29
3.5
29
73
18
90
37
3
20
38
1.71
94293--94601
118
2.6
118
76
9
324
37
4
23
34
1.76
94347--94601
59
4.3
59
78
6
248
37
4
23
34
1.75
95629--95682
9
5.8
9
80
10
56
40
0
1
57
1.09
96868--96952
44
1.9
44
92
0
143
28
7
17
47
1.74
104018--104217
100
2.0
100
98
0
382
47
6
10
37
1.62
104864--104922
17
3.5
17
79
6
57
44
5
3
47
1.42
104879--104925
6
8.2
6
76
9
53
51
2
2
44
1.25
104879--104925
17
2.8
17
90
0
67
51
2
2
44
1.25
111727--111770
23
2.0
22
82
13
54
38
2
6
52
1.41
112191--112336
17
8.4
17
86
3
202
43
0
1
54
1.13
112225--112281
11
5.1
11
83
8
62
40
0
0
59
0.97
112227--112336
6
19.2
6
74
15
99
42
0
0
55
1.12
112191--112336
35
4.2
34
90
2
202
43
0
1
54
1.13

Tables:   1

The End!