Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014586.1 Kokia drynarioides strain JFW-HI SEQ_129625, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  138046

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6497--6536
19
2.1
20
86
9
57
12
7
5
75
1.18
7407--7437
16
1.9
16
93
0
53
51
16
6
25
1.68
9535--9592
6
9.7
6
90
0
80
46
15
3
34
1.63
16897--17308
224
1.8
222
84
3
558
28
19
12
40
1.87
24624--24669
22
2.0
23
84
12
60
39
2
0
58
1.10
24634--24711
31
2.7
28
77
15
88
34
3
1
60
1.23
28910--29666
378
2.0
369
80
7
851
33
14
14
37
1.87
30224--30280
30
1.9
30
85
3
80
56
1
0
42
1.10
30417--30445
15
1.9
15
100
0
58
31
6
0
62
1.22
31579--31622
21
2.0
22
86
4
63
25
15
29
29
1.96
31448--31803
197
1.8
197
91
0
586
23
9
22
43
1.83
41777--41811
17
2.0
18
88
5
54
28
14
31
25
1.95
46319--46352
15
2.3
15
89
0
50
50
11
5
32
1.63
51328--51426
8
11.6
8
82
8
54
45
36
2
16
1.59
51359--51395
2
18.5
2
100
0
74
51
48
0
0
1.00
51400--51426
4
6.8
4
100
0
54
48
25
0
25
1.52
63104--63157
19
2.7
19
78
18
56
40
7
3
48
1.49
66659--66689
15
2.0
16
93
6
55
64
16
0
19
1.29
78555--78592
16
2.4
16
86
4
51
36
5
0
57
1.21
78568--78601
16
2.1
16
88
5
50
44
5
2
47
1.42
92601--92672
36
2.0
36
100
0
144
41
16
16
25
1.89
98209--98263
4
13.8
4
96
0
101
25
1
25
47
1.62
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
100930--100957
2
14.0
2
100
0
56
50
0
0
50
1.00
103435--103459
2
12.5
2
100
0
50
52
0
0
48
1.00
107556--107620
30
2.2
29
81
10
69
44
0
9
46
1.35
112264--112289
2
13.0
2
100
0
52
50
0
0
50
1.00
112904--112932
2
14.5
2
100
0
58
51
0
48
0
1.00
125318--125378
29
2.0
31
87
6
90
36
1
9
52
1.45
131783--131820
17
2.3
17
86
4
51
55
2
7
34
1.43
131778--131820
16
2.6
16
81
3
50
53
4
6
34
1.49
132570--132687
4
30.2
4
79
8
109
22
5
26
46
1.72
132633--132715
8
10.4
8
81
5
60
15
2
33
48
1.58
135257--135472
85
2.6
82
79
9
229
30
26
8
34
1.86

Tables:   1

The End!