Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014596.1 Kokia drynarioides strain JFW-HI SEQ_129635, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39270

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2735--2926
96
2.0
96
84
6
255
37
13
18
30
1.89
3185--3360
59
3.0
59
81
8
155
34
4
28
32
1.78
3249--3360
30
3.8
29
87
4
154
33
2
29
33
1.72
3219--3360
59
2.4
58
89
3
205
33
3
29
33
1.75
3411--3569
29
5.4
30
80
10
177
33
3
27
35
1.75
3411--3560
59
2.5
59
91
2
230
34
4
26
34
1.75
4578--4612
3
11.3
3
87
6
52
28
0
2
68
1.04
5307--5357
6
8.8
6
75
16
54
52
1
3
41
1.31
5309--5357
17
2.8
18
87
9
75
55
2
4
38
1.31
6009--6219
115
1.8
114
90
3
343
24
24
17
34
1.96
13063--13101
14
2.7
15
80
8
53
25
7
10
56
1.59
16910--16955
25
1.9
23
86
8
65
34
4
6
54
1.46
17335--17373
14
2.7
15
80
8
53
25
7
10
56
1.59
24463--24553
45
2.0
45
91
4
148
28
21
28
20
1.99
25982--26107
44
2.8
44
90
7
209
25
24
27
22
2.00
34593--34625
17
2.0
17
94
5
59
24
3
6
66
1.28
35165--35210
24
1.9
24
86
0
65
26
10
13
50
1.74
37126--37177
24
2.2
24
96
0
95
28
9
7
53
1.61

Tables:   1

The End!