Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014601.1 Kokia drynarioides strain JFW-HI SEQ_129640, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  86514

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
794--904
18
6.4
17
76
10
107
53
4
0
41
1.27
794--904
35
3.2
35
77
12
111
53
4
0
41
1.27
7626--7958
30
11.1
29
81
8
185
36
2
24
36
1.70
7627--7954
60
5.5
58
82
8
295
36
2
23
37
1.69
7625--7954
90
3.7
89
81
6
353
36
2
23
36
1.70
9023--9075
12
4.6
12
82
17
60
35
0
1
62
1.06
9756--9793
2
19.0
2
88
0
58
50
5
0
44
1.24
10848--11020
29
6.0
29
79
11
176
33
5
27
32
1.81
10849--11020
58
2.9
58
83
6
206
33
5
27
32
1.81
12829--12871
18
2.4
18
88
3
61
51
0
2
46
1.13
12831--12888
17
3.4
17
85
4
71
51
1
1
44
1.21
12868--12901
11
3.1
11
91
0
50
58
2
0
38
1.13
15135--15185
22
2.3
22
80
16
61
25
0
7
66
1.18
15142--15194
27
1.9
28
81
11
65
26
1
7
64
1.31
15220--15325
29
3.5
28
71
14
86
24
16
14
44
1.85
15185--15322
62
2.3
60
86
5
188
22
17
13
46
1.83
16933--16963
8
4.0
8
95
4
55
35
0
12
51
1.40
16866--17047
92
2.0
91
97
1
346
31
4
17
46
1.69
21940--21980
14
2.9
14
77
0
55
39
0
7
53
1.29
25742--25791
21
2.4
21
89
0
73
26
4
14
56
1.56
26850--26888
17
2.4
17
86
4
53
48
5
2
43
1.38
26880--26912
16
2.1
16
88
11
50
72
0
0
27
0.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27751--27795
23
1.9
24
90
4
74
26
0
4
68
1.08
27902--27937
18
2.0
18
88
0
54
41
0
2
55
1.14
28928--28963
4
8.8
4
93
6
63
52
0
0
47
1.00
30106--30165
28
2.2
27
82
8
77
45
1
6
46
1.39
34993--35019
3
9.0
3
100
0
54
33
0
0
66
0.92
42770--42801
3
10.7
3
100
0
64
31
0
0
68
0.90
45884--45922
20
1.9
21
84
5
53
30
10
23
35
1.88
56183--56221
21
1.9
20
89
5
60
64
2
0
33
1.08
76461--76495
15
2.3
15
90
5
52
74
0
5
20
1.02
76738--76835
33
2.9
33
79
14
112
38
2
0
59
1.09
76757--76798
22
1.9
22
85
0
57
35
0
0
64
0.94
76747--76841
18
5.5
18
70
22
78
38
1
0
60
1.04
85018--85087
20
3.4
20
82
7
95
52
0
0
47
1.00
85008--85087
42
1.9
42
97
0
151
51
0
0
48
1.00
85008--85071
20
3.0
22
81
9
96
51
0
0
48
1.00
85043--85099
29
2.0
29
82
6
71
49
0
0
50
1.00

Tables:   1

The End!