Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014602.1 Kokia drynarioides strain JFW-HI SEQ_129641, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80342

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1164--1280
60
1.9
61
79
8
132
38
19
19
22
1.94
4927--4994
31
2.2
31
84
5
84
60
2
0
36
1.12
5720--5755
17
2.2
16
90
5
54
30
0
2
66
1.06
5720--5755
8
4.4
8
89
6
54
30
0
2
66
1.06
7269--7321
26
2.0
26
100
0
106
33
3
32
30
1.76
8360--8741
191
2.0
191
96
1
712
23
16
15
44
1.86
14597--14642
12
3.8
12
80
11
58
30
8
17
43
1.79
14597--14668
24
3.0
23
76
9
65
29
9
16
44
1.80
14608--14678
23
3.0
23
81
2
88
33
9
12
43
1.76
14709--14766
30
2.0
30
86
6
84
56
13
8
20
1.63
24946--25056
17
6.3
18
81
11
124
42
0
2
54
1.21
24946--25056
35
3.2
34
84
6
134
42
0
2
54
1.21
24946--25056
52
2.1
52
88
5
161
42
0
2
54
1.21
24978--25038
6
10.5
6
73
7
54
42
1
1
54
1.20
24964--25068
52
2.0
52
80
7
115
44
0
2
51
1.22
25742--25815
32
2.3
34
80
15
86
51
1
1
45
1.18
25741--25792
15
3.5
15
84
5
61
51
0
1
46
1.12
26893--27237
59
5.9
58
80
8
351
32
28
5
32
1.80
26884--27233
88
4.0
85
76
11
298
32
28
5
32
1.80
26884--27237
29
12.0
30
77
12
317
32
28
5
32
1.81
40455--40482
14
2.0
14
100
0
56
64
14
7
14
1.48
49637--49668
16
1.9
17
93
6
57
18
3
6
71
1.20
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51603--51650
20
2.5
19
80
12
62
58
0
0
41
0.98
53067--53093
13
2.1
13
100
0
54
40
0
0
59
0.98
53874--53935
28
2.2
28
97
2
115
9
30
9
50
1.67
54159--54187
2
14.5
2
100
0
58
51
0
0
48
1.00
61457--61520
29
2.2
30
86
8
87
26
4
12
56
1.56
69670--69713
22
2.0
22
100
0
88
31
4
27
36
1.77
77052--77097
24
1.9
24
82
8
58
4
30
6
58
1.43

Tables:   1

The End!