Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014603.1 Kokia drynarioides strain JFW-HI SEQ_129642, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  192055

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5083--5134
16
3.3
15
83
5
59
3
15
1
78
0.98
13356--13395
20
2.0
21
85
5
55
40
15
30
15
1.87
19179--19237
20
2.9
20
78
9
57
32
1
3
62
1.21
22082--22285
107
2.0
102
85
4
273
48
19
12
20
1.81
28828--28880
14
4.0
13
77
20
56
20
0
3
75
0.96
28827--28879
20
2.7
20
79
5
63
22
0
3
73
0.99
42885--42951
25
2.6
26
75
15
68
31
7
4
56
1.47
43297--43330
16
2.1
17
88
5
52
50
0
0
50
1.00
47804--47863
31
1.9
31
100
0
120
35
13
8
43
1.74
53097--53141
22
2.0
23
87
8
67
35
4
2
57
1.31
53282--53306
7
3.6
7
100
0
50
44
0
12
44
1.41
64258--64323
30
2.2
31
84
12
86
51
0
1
46
1.10
65445--65471
5
5.4
5
100
0
54
18
0
0
81
0.69
67398--67425
2
14.0
2
100
0
56
50
0
0
50
1.00
79197--79369
43
4.2
43
76
12
182
24
17
28
29
1.97
79237--79351
35
3.0
36
74
18
115
25
20
27
26
1.99
81259--81301
21
2.0
21
91
8
70
41
18
11
27
1.85
105102--105143
13
3.1
13
86
6
57
78
0
21
0
0.75
105110--105159
17
2.8
18
84
6
66
74
0
26
0
0.83
105102--105140
21
1.9
21
89
5
62
79
0
20
0
0.73
105813--105861
16
3.2
16
75
16
59
59
6
0
34
1.22
107164--107248
43
2.0
43
86
4
118
30
11
10
47
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
107816--107910
45
2.1
45
88
0
136
33
29
16
20
1.95
108312--108367
24
2.4
24
93
3
96
41
0
26
32
1.56
111430--111480
21
2.4
22
80
9
61
0
33
0
66
0.92
111430--111479
4
12.0
4
79
8
55
0
32
0
68
0.90
111451--111478
13
2.2
13
100
0
56
0
21
0
78
0.75
115888--115947
30
2.0
30
90
6
95
58
5
6
30
1.45
124793--124820
3
9.3
3
100
0
56
67
0
32
0
0.91
126066--126130
10
6.4
10
76
3
58
58
7
0
33
1.27
126270--126335
11
6.4
10
77
10
53
34
3
0
62
1.11
134662--134699
15
2.5
15
87
12
51
39
7
0
52
1.31
137880--137933
23
2.3
23
84
12
67
11
25
24
38
1.88
139785--139827
21
2.1
21
86
4
61
76
0
4
18
0.95
141386--141415
10
2.9
10
95
5
51
10
0
3
86
0.67
142158--142185
13
2.2
13
100
0
56
0
25
7
67
1.15
153551--153597
3
15.7
3
95
0
85
63
0
36
0
0.94
154894--155064
58
3.0
58
83
6
215
53
1
1
43
1.18
154979--155022
15
2.8
15
82
6
52
54
0
0
45
0.99
158706--158747
20
2.1
20
86
8
59
52
7
0
40
1.29
158679--158781
54
1.9
53
86
5
145
53
4
2
38
1.37
159095--159149
25
2.2
26
83
9
69
58
3
3
34
1.33
165500--165549
23
2.2
23
82
10
59
44
0
6
50
1.26
175450--175476
3
9.0
3
100
0
54
0
0
66
33
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
176792--176816
6
4.2
6
100
0
50
0
0
52
48
1.00
177633--177672
20
2.0
20
100
0
80
35
15
0
50
1.44
190218--190356
75
1.9
74
86
1
197
41
9
6
42
1.63

Tables:   1

The End!