Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014612.1 Kokia drynarioides strain JFW-HI SEQ_129651, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  117698

Tables:   1   

This is table  1  of  1  ( 48 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
635--670
2
18.0
2
100
0
72
50
0
0
50
1.00
7066--7116
22
2.4
21
80
9
59
64
0
0
35
0.94
9450--9528
35
2.1
35
84
9
95
43
3
18
34
1.69
10241--10288
19
2.3
20
82
13
53
33
0
12
54
1.38
13259--13310
17
2.9
17
80
13
52
46
5
0
48
1.26
13336--13360
6
4.2
6
100
0
50
52
0
0
48
1.00
13882--13932
19
2.8
18
82
5
66
15
5
1
76
1.07
17525--17557
10
3.4
10
91
4
50
66
0
12
21
1.23
19762--19800
6
6.5
6
87
0
51
23
30
0
46
1.53
24226--24275
26
1.9
26
83
0
64
12
34
0
54
1.38
26571--26636
17
3.7
18
75
22
59
72
4
0
22
1.02
26579--26636
24
2.4
24
83
8
73
75
5
0
18
0.98
26584--26634
18
2.8
17
82
8
57
76
5
0
17
0.98
36125--36155
9
3.4
9
95
0
53
38
16
9
35
1.81
36862--36911
24
2.1
24
92
0
82
44
34
12
10
1.75
37865--37908
19
2.4
18
84
3
61
59
0
0
40
0.98
43497--43537
16
2.6
16
88
3
57
75
2
0
21
0.92
43497--43536
19
2.1
19
85
4
53
75
2
0
22
0.93
50649--50706
27
2.1
28
87
6
82
31
20
0
48
1.50
51476--51508
3
11.3
3
93
6
59
33
0
0
66
0.92
54870--54900
15
2.1
15
93
0
53
29
19
9
41
1.83
56550--56574
13
1.9
13
100
0
50
88
0
12
0
0.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56963--57054
18
4.9
18
69
19
64
60
3
1
34
1.20
57002--57081
28
2.9
28
72
10
74
62
1
5
31
1.24
58931--58985
21
2.7
21
82
2
67
56
9
3
30
1.48
62151--62192
6
6.8
6
91
2
66
45
0
2
52
1.13
65762--65791
7
4.3
7
91
0
51
30
26
26
16
1.97
71734--71786
18
3.0
17
79
15
63
67
7
0
24
1.16
72995--73064
22
3.1
21
73
10
59
22
0
34
42
1.54
80150--80325
41
4.6
40
76
16
176
32
21
26
19
1.97
80150--80286
73
1.9
70
88
4
202
35
21
24
18
1.96
80186--80247
32
1.9
32
93
0
106
32
25
22
19
1.97
80293--80349
24
2.4
24
96
0
105
29
22
31
15
1.95
80218--80325
39
2.7
41
85
8
150
31
21
26
20
1.98
80254--80406
65
2.4
65
86
3
204
30
20
31
18
1.96
80638--80821
43
4.3
43
90
0
269
23
19
27
29
1.98
83113--83155
18
2.4
18
88
7
61
53
0
0
46
1.00
84609--84658
22
2.2
23
82
13
59
36
4
6
54
1.44
88845--88935
41
2.2
43
78
13
100
18
9
35
36
1.84
91133--91176
5
9.2
5
90
9
74
40
38
20
0
1.53
99311--99435
9
13.6
9
68
15
60
33
2
2
61
1.22
99311--99373
10
6.6
10
74
7
51
30
3
1
65
1.18
99406--99436
8
3.8
8
91
8
53
35
0
0
64
0.94
104397--104457
14
4.4
14
75
21
56
45
8
3
42
1.50
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
111053--111188
18
7.3
18
69
16
73
31
5
1
61
1.26
111054--111102
9
5.4
9
77
0
53
26
8
2
63
1.34
112983--113034
13
4.1
13
72
5
52
34
7
26
30
1.85
117605--117654
20
2.5
20
80
0
64
62
0
38
0
0.96

Tables:   1

The End!