Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014619.1 Kokia drynarioides strain JFW-HI SEQ_129658, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73834

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
642--703
30
2.0
31
87
6
90
22
8
8
61
1.50
695--756
32
1.9
33
83
9
83
35
14
9
40
1.79
8459--8507
19
2.5
20
80
12
57
67
16
8
8
1.40
15593--15627
18
1.9
18
88
0
52
42
11
14
31
1.81
17636--17676
21
2.0
21
85
9
57
39
29
7
24
1.82
19201--19663
38
11.9
38
81
5
404
34
17
15
31
1.92
19447--19544
49
2.0
49
100
0
196
30
22
16
30
1.96
19412--19657
87
3.0
87
81
6
244
33
20
15
30
1.93
19337--19657
163
2.0
163
86
0
453
34
19
15
31
1.92
23079--23171
26
3.6
26
73
5
80
24
23
19
32
1.98
36136--36258
41
3.0
41
86
1
165
39
8
26
26
1.83
42030--42059
15
2.0
15
93
0
51
20
3
33
43
1.68
46770--46817
24
1.9
26
84
16
66
45
0
22
31
1.53
46885--46971
22
3.9
22
83
4
95
9
20
25
44
1.81
47626--47664
19
1.9
19
85
10
51
38
5
23
33
1.77
49436--49653
41
5.2
41
81
5
206
37
9
26
26
1.87
50759--50904
73
2.0
73
98
0
283
39
16
18
26
1.91
51482--51523
20
2.1
20
100
0
84
38
23
16
21
1.93
58068--58097
2
14.5
2
93
6
51
46
0
3
50
1.18
58895--59044
29
5.0
29
79
7
149
36
7
20
35
1.81
59018--59106
40
2.2
40
89
0
133
49
5
23
21
1.70
60867--60898
14
2.3
15
89
10
50
75
0
0
25
0.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62177--62215
15
2.6
15
87
0
51
5
2
12
79
1.00
72343--72432
23
3.9
23
73
12
76
46
16
24
12
1.81
72424--72464
16
2.6
16
96
0
73
46
21
19
12
1.82
72452--72663
23
9.2
23
84
7
245
41
22
23
12
1.87

Tables:   1

The End!