Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014620.1 Kokia drynarioides strain JFW-HI SEQ_129659, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  168405

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
925--972
23
2.1
23
92
0
78
8
16
25
50
1.73
5620--5668
24
2.0
24
100
0
98
32
24
0
42
1.55
19856--20192
93
3.6
93
92
2
514
32
18
32
16
1.93
29682--29719
12
3.1
12
92
7
67
50
0
2
47
1.15
43642--43666
12
2.1
12
100
0
50
36
8
16
40
1.77
49188--49247
25
2.4
25
75
8
61
46
0
3
50
1.18
51613--51696
37
2.3
36
81
2
105
34
23
5
35
1.80
53753--53791
21
1.9
20
84
5
51
48
5
2
43
1.38
58024--58056
14
2.3
15
89
5
50
27
3
0
69
1.03
58884--58937
28
2.0
28
85
3
74
33
1
1
62
1.16
59451--59478
2
14.0
2
100
0
56
50
0
0
50
1.00
82219--82253
12
2.9
12
82
0
52
11
0
14
74
1.08
82273--82316
22
2.0
22
81
0
52
27
4
2
65
1.23
90450--90596
46
3.2
47
81
12
155
44
21
21
12
1.85
90451--90596
23
6.3
23
82
9
140
43
21
21
12
1.85
99834--99869
18
2.0
18
94
0
63
22
19
22
36
1.95
100018--100096
23
3.3
23
84
6
113
41
21
24
12
1.87
99983--100096
48
2.4
48
86
2
149
42
19
24
14
1.88
106332--106397
20
3.3
19
79
8
78
45
18
4
31
1.69
106323--106402
40
2.0
42
92
5
137
43
17
5
33
1.71
112344--112382
21
1.9
20
84
5
51
38
2
0
58
1.12
113652--113704
16
3.4
16
76
21
58
43
0
1
54
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
114451--114488
19
1.9
20
89
10
60
65
2
0
31
1.06
114819--114881
26
2.4
27
81
10
85
41
3
4
50
1.39
122402--122468
28
2.3
30
77
12
77
56
5
0
37
1.24
122425--122466
20
2.0
21
86
13
61
52
4
0
42
1.22
125622--125667
15
2.9
16
83
6
58
39
10
13
36
1.79
134047--134080
17
1.9
18
88
5
52
67
5
2
23
1.26
138109--138151
11
3.8
11
78
3
50
81
0
4
13
0.84
139642--139706
30
2.1
32
82
5
80
53
3
1
41
1.25
141093--141157
19
3.5
19
70
16
64
47
0
0
52
1.00
142585--142636
25
2.1
25
96
0
95
40
15
32
11
1.83
142637--142692
22
2.5
23
88
5
87
41
25
23
10
1.86
145378--145413
16
2.2
16
90
0
54
52
0
16
30
1.44
145464--145496
17
1.9
18
88
11
52
12
3
6
78
1.04
150447--150498
25
2.0
27
85
7
72
67
1
3
26
1.18
158224--158278
26
2.1
26
96
0
101
47
20
10
21
1.80
161378--161423
20
2.2
21
88
3
67
43
0
4
52
1.21
162436--162486
25
2.1
25
82
17
63
49
0
5
45
1.26
163622--163656
18
2.0
17
88
5
52
68
2
2
25
1.17
165097--165177
29
2.7
29
79
9
92
33
6
13
46
1.68
165815--165868
25
2.2
24
87
9
74
38
0
0
61
0.96

Tables:   1

The End!